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Report for CCDS81522.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81522.1 Public Homo sapiens 10 UROS 24 110 108 CCDS HistoryNCBI Gene:7390Re-query CCDS DB by CCDS ID:81522.1Re-query CCDS DB by GeneID:7390See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81522.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368778.7 ENSP00000357767.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000368778.7Link to Ensembl Protein Viewer:ENSP00000357767.3Re-query CCDS DB by Nucleotide ID:ENST00000368778Re-query CCDS DB by Protein ID:ENSP00000357767
Original member Current member EBI ENST00000648427.1 ENSP00000497909.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000648427.1Link to Ensembl Protein Viewer:ENSP00000497909.1Re-query CCDS DB by Nucleotide ID:ENST00000648427Re-query CCDS DB by Protein ID:ENSP00000497909
Original member Current member NCBI NM_001324039.2 NP_001310968.1 Accepted alive Link to Nucleotide Sequence:NM_001324039.2Link to Protein Sequence:NP_001310968.1Re-query CCDS DB by Nucleotide ID:NM_001324039Re-query CCDS DB by Protein ID:NP_001310968Link to BLAST:NP_001310968.1

Chromosomal Locations for CCDS 81522.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 125802999 125803024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 125807413 125807487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 125812214 125812288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 125815034 125815130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 125816177 125816260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 125816437 125816499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (420 nt):
ATGAAGGTTCTTTTACTGAAGGATGCGAAGGAAGATGACTGTGGCCAGGATCCGTATATCAGGGAATTAG
GATTATATGGACTTGAAGCCACTTTGATCCCTGTTTTATCGTTTGAGTTTTTGTCTCTTCCCAGTTTCTC
TGAGAAGCTTTCTCATCCTGAAGATTACGGGGGACTCATTTTTACCAGCCCCAGAGCAGTGGAAGCAGCA
GAGTTATGTTTGGAGCAAAACAATAAAACTGAAGTCTGGGAAAGGTCTCTGAAAGAAAAATGGAATGCCA
AGTCAGTGTATGTGGTTGGAAATGCTACTGCTTCTCTAGTGAGTAAAATTGGCCTGGATACAGAAGGAGA
AACCTGTGGAAATGCAGAAAAGCTTGCAGAATATATTTGTTCCAGTGAAGAAGTCAAAGGAATCTTTTGA

Translation (139 aa):
MKVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLSFEFLSLPSFSEKLSHPEDYGGLIFTSPRAVEAA
ELCLEQNNKTEVWERSLKEKWNAKSVYVVGNATASLVSKIGLDTEGETCGNAEKLAEYICSSEEVKGIF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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