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Report for CCDS6475.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6475.1 Public Homo sapiens 9 ZDHHC21 24 110 108 CCDS HistoryNCBI Gene:340481Re-query CCDS DB by CCDS ID:6475.1Re-query CCDS DB by GeneID:340481See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6475.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000380916.9 ENSP00000370303.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000380916.9Link to Ensembl Protein Viewer:ENSP00000370303.3Re-query CCDS DB by Nucleotide ID:ENST00000380916Re-query CCDS DB by Protein ID:ENSP00000370303
Original member Current member NCBI NM_001354118.2 NP_001341047.1 Accepted alive Link to Nucleotide Sequence:NM_001354118.2Link to Protein Sequence:NP_001341047.1Re-query CCDS DB by Nucleotide ID:NM_001354118Re-query CCDS DB by Protein ID:NP_001341047Link to BLAST:NP_001341047.1
Original member Current member NCBI NM_001354119.2 NP_001341048.1 Accepted alive Link to Nucleotide Sequence:NM_001354119.2Link to Protein Sequence:NP_001341048.1Re-query CCDS DB by Nucleotide ID:NM_001354119Re-query CCDS DB by Protein ID:NP_001341048Link to BLAST:NP_001341048.1
Original member Current member NCBI NM_001354120.2 NP_001341049.1 Accepted alive Link to Nucleotide Sequence:NM_001354120.2Link to Protein Sequence:NP_001341049.1Re-query CCDS DB by Nucleotide ID:NM_001354120Re-query CCDS DB by Protein ID:NP_001341049Link to BLAST:NP_001341049.1
Original member Current member NCBI NM_001354121.2 NP_001341050.1 Accepted alive Link to Nucleotide Sequence:NM_001354121.2Link to Protein Sequence:NP_001341050.1Re-query CCDS DB by Nucleotide ID:NM_001354121Re-query CCDS DB by Protein ID:NP_001341050Link to BLAST:NP_001341050.1
Original member Current member NCBI NM_001354122.2 NP_001341051.1 Accepted alive Link to Nucleotide Sequence:NM_001354122.2Link to Protein Sequence:NP_001341051.1Re-query CCDS DB by Nucleotide ID:NM_001354122Re-query CCDS DB by Protein ID:NP_001341051Link to BLAST:NP_001341051.1
Original member Current member NCBI NM_001354123.2 NP_001341052.1 Accepted alive Link to Nucleotide Sequence:NM_001354123.2Link to Protein Sequence:NP_001341052.1Re-query CCDS DB by Nucleotide ID:NM_001354123Re-query CCDS DB by Protein ID:NP_001341052Link to BLAST:NP_001341052.1
Original member Current member NCBI NM_001354124.2 NP_001341053.1 Accepted alive Link to Nucleotide Sequence:NM_001354124.2Link to Protein Sequence:NP_001341053.1Re-query CCDS DB by Nucleotide ID:NM_001354124Re-query CCDS DB by Protein ID:NP_001341053Link to BLAST:NP_001341053.1
Original member Current member NCBI NM_178566.6 NP_848661.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_178566.6Link to Protein Sequence:NP_848661.1Re-query CCDS DB by Nucleotide ID:NM_178566Re-query CCDS DB by Protein ID:NP_848661Link to BLAST:NP_848661.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001341047.1 265 Q8IVQ6 265 100% 0 0
NP_001341048.1 265 Q8IVQ6 265 100% 0 0
NP_001341049.1 265 Q8IVQ6 265 100% 0 0
NP_001341050.1 265 Q8IVQ6 265 100% 0 0
NP_001341051.1 265 Q8IVQ6 265 100% 0 0
NP_001341052.1 265 Q8IVQ6 265 100% 0 0
NP_001341053.1 265 Q8IVQ6 265 100% 0 0
NP_848661.1 265 Q8IVQ6 265 100% 0 0

Chromosomal Locations for CCDS 6475.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 14618966 14619098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 14619639 14619682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 14639896 14640012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 14658749 14658887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 14662215 14662326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 14672830 14672928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 14674187 14674340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (798 nt):
ATGGGTCTCCGGATTCACTTTGTTGTTGACCCACATGGTTGGTGCTGCATGGGTTTGATTGTCTTTGTTT
GGTTATACAATATTGTTTTAATTCCCAAAATTGTCCTCTTTCCTCACTATGAAGAAGGACATATTCCAGG
CATATTAATAATAATATTCTATGGCATTTCCATATTCTGTCTGGTTGCCTTAGTGAGGGCCTCCATAACT
GATCCAGGAAGACTCCCTGAGAACCCCAAGATCCCACATGGAGAAAGGGAGTTCTGGGAATTATGTAACA
AGTGTAATTTGATGAGACCAAAGCGTTCCCATCACTGTAGCCGCTGCGGCCACTGTGTGAGGAGAATGGA
TCATCACTGTCCATGGATTAACAATTGTGTTGGTGAAGATAATCATTGGCTCTTTCTGCAGTTGTGTTTC
TACACTGAACTTCTTACTTGCTACGCACTGATGTTTTCTTTCTGCCACTATTACTATTTTCTTCCACTAA
AAAAGCGTAATTTGGACCTCTTTGTTTTTAGACATGAATTGGCCATAATGAGACTAGCAGCCTTTATGGG
CATTACTATGTTAGTTGGAATAACTGGACTCTTTTACACTCAACTAATTGGCATCATCACAGATACAACA
TCTATTGAAAAGATGTCAAACTGTTGTGAAGATATATCGAGGCCCCGAAAGCCATGGCAGCAGACCTTCT
CAGAAGTTTTTGGCACTCGTTGGAAGATCCTGTGGTTCATTCCTTTCAGGCAGAGGCAACCACTGCGAGT
TCCCTACCACTTTGCCAATCATGTCTAA

Translation (265 aa):
MGLRIHFVVDPHGWCCMGLIVFVWLYNIVLIPKIVLFPHYEEGHIPGILIIIFYGISIFCLVALVRASIT
DPGRLPENPKIPHGEREFWELCNKCNLMRPKRSHHCSRCGHCVRRMDHHCPWINNCVGEDNHWLFLQLCF
YTELLTCYALMFSFCHYYYFLPLKKRNLDLFVFRHELAIMRLAAFMGITMLVGITGLFYTQLIGIITDTT
SIEKMSNCCEDISRPRKPWQQTFSEVFGTRWKILWFIPFRQRQPLRVPYHFANHV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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