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Report for CCDS14707.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14707.1 Public Homo sapiens X GABRQ 24 110 108 CCDS HistoryNCBI Gene:55879Re-query CCDS DB by CCDS ID:14707.1Re-query CCDS DB by GeneID:55879See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14707.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000598523.3 ENSP00000469332.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000598523.3Link to Ensembl Protein Viewer:ENSP00000469332.1Re-query CCDS DB by Nucleotide ID:ENST00000598523Re-query CCDS DB by Protein ID:ENSP00000469332
Original member Current member NCBI NM_018558.4 NP_061028.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018558.4Link to Protein Sequence:NP_061028.3Re-query CCDS DB by Nucleotide ID:NM_018558Re-query CCDS DB by Protein ID:NP_061028Link to BLAST:NP_061028.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061028.3 632 Q9UN88 632 100% 0 0

Chromosomal Locations for CCDS 14707.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 152638203 152638351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152640378 152640466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152645527 152645594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152646948 152647168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152649251 152649333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152649742 152649879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152650428 152650580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152651526 152651782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152652541 152653281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1899 nt):
ATGGGCATCCGAGGCATGCTGCGAGCCGCAGTGATCCTGCTGCTCATCAGGACCTGGCTCGCGGAGGGCA
ACTACCCCAGTCCCATCCCGAAATTCCACTTCGAGTTCTCCTCTGCTGTGCCCGAAGTCGTCCTGAACCT
CTTCAACTGCAAAAATTGTGCAAATGAAGCTGTGGTTCAAAAGATTTTGGACAGGGTGCTGTCAAGATAC
GATGTCCGCCTGAGACCGAATTTTGGAGGTGCCCCTGTGCCTGTGAGAATATCTATTTATGTCACGAGCA
TTGAACAGATCTCAGAAATGAATATGGACTACACGATCACGATGTTTTTTCATCAGACTTGGAAAGATTC
ACGCTTAGCATACTATGAGACCACCCTGAACTTGACCCTGGACTATCGGATGCATGAGAAGTTGTGGGTC
CCTGACTGCTACTTTCTGAACAGCAAGGATGCTTTCGTGCATGATGTGACTGTGGAGAATCGCGTGTTTC
AGCTTCACCCAGATGGAACGGTGCGGTACGGCATCCGACTCACCACTACAGCAGCTTGTTCCCTGGATCT
GCATAAATTCCCTATGGACAAGCAGGCCTGCAACCTGGTGGTAGAGAGCTATGGTTACACGGTTGAAGAC
ATCATATTATTCTGGGATGACAATGGGAACGCCATCCACATGACTGAGGAGCTGCATATCCCTCAGTTCA
CTTTCCTGGGAAGGACGATTACTAGCAAGGAGGTGTATTTCTACACAGGTTCCTACATACGCCTGATACT
GAAGTTCCAGGTTCAGAGGGAAGTTAACAGCTACCTTGTGCAAGTCTACTGGCCTACTGTCCTCACCACT
ATTACCTCTTGGATATCGTTTTGGATGAACTATGATTCCTCTGCAGCCAGGGTGACAATTGGCTTAACTT
CAATGCTCATCCTGACCACCATCGACTCACATCTGCGGGATAAGCTCCCCAACATTTCCTGTATCAAGGC
CATTGATATCTATATCCTCGTGTGCTTGTTCTTTGTGTTCCTGTCCTTGCTGGAGTATGTCTACATCAAC
TATCTTTTCTACAGTCGAGGACCTCGGCGCCAGCCTAGGCGACACAGGAGACCCCGAAGAGTCATTGCCC
GCTACCGCTACCAGCAAGTGGTGGTAGGAAACGTGCAGGATGGCCTGATTAACGTGGAAGACGGAGTCAG
CTCTCTCCCCATCACCCCAGCGCAGGCCCCCCTGGCAAGCCCGGAAAGCCTCGGTTCTTTGACGTCCACC
TCCGAGCAGGCCCAGCTGGCCACCTCGGAAAGCCTCAGCCCACTCACTTCTCTCTCAGGCCAGGCCCCCC
TGGCCACTGGAGAAAGCCTGAGCGATCTCCCCTCCACCTCAGAGCAGGCCCGGCACAGCTATGGTGTTCG
CTTTAATGGTTTCCAGGCTGATGACAGTATTATTCCTACCGAAATCCGCAACCGTGTCGAAGCCCATGGC
CATGGTGTTACCCATGACCATGAAGATTCCAATGAGAGCTTGAGCTCGGATGAGCGCCATGGCCATGGCC
CCAGTGGGAAGCCCATGCTTCACCATGGCGAGAAGGGTGTGCAAGAAGCAGGCTGGGACCTTGATGACAA
CAATGACAAGAGCGACTGCCTTGCCATTAAGGAGCAATTCAAGTGTGATACTAACAGTACCTGGGGCCTT
AATGATGATGAGCTCATGGCCCATGGCCAAGAGAAGGACAGTAGCTCAGAGTCTGAGGATAGTTGCCCCC
CAAGCCCTGGGTGCTCCTTCACTGAAGGGTTCTCCTTCGATCTCTTTAATCCTGACTACGTCCCAAAGGT
CGACAAGTGGTCCCGGTTCCTCTTCCCTCTGGCCTTTGGGTTGTTCAACATTGTTTACTGGGTATACCAT
ATGTATTAG

Translation (632 aa):
MGIRGMLRAAVILLLIRTWLAEGNYPSPIPKFHFEFSSAVPEVVLNLFNCKNCANEAVVQKILDRVLSRY
DVRLRPNFGGAPVPVRISIYVTSIEQISEMNMDYTITMFFHQTWKDSRLAYYETTLNLTLDYRMHEKLWV
PDCYFLNSKDAFVHDVTVENRVFQLHPDGTVRYGIRLTTTAACSLDLHKFPMDKQACNLVVESYGYTVED
IILFWDDNGNAIHMTEELHIPQFTFLGRTITSKEVYFYTGSYIRLILKFQVQREVNSYLVQVYWPTVLTT
ITSWISFWMNYDSSAARVTIGLTSMLILTTIDSHLRDKLPNISCIKAIDIYILVCLFFVFLSLLEYVYIN
YLFYSRGPRRQPRRHRRPRRVIARYRYQQVVVGNVQDGLINVEDGVSSLPITPAQAPLASPESLGSLTST
SEQAQLATSESLSPLTSLSGQAPLATGESLSDLPSTSEQARHSYGVRFNGFQADDSIIPTEIRNRVEAHG
HGVTHDHEDSNESLSSDERHGHGPSGKPMLHHGEKGVQEAGWDLDDNNDKSDCLAIKEQFKCDTNSTWGL
NDDELMAHGQEKDSSSESEDSCPPSPGCSFTEGFSFDLFNPDYVPKVDKWSRFLFPLAFGLFNIVYWVYH
MY


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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