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Report for CCDS10288.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10288.1 Public Homo sapiens 15 NRG4 24 110 108 CCDS HistoryNCBI Gene:145957Re-query CCDS DB by CCDS ID:10288.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10288.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000394907.8 ENSP00000378367.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000394907.8Link to Ensembl Protein Viewer:ENSP00000378367.3Re-query CCDS DB by Nucleotide ID:ENST00000394907Re-query CCDS DB by Protein ID:ENSP00000378367
Original member Current member EBI ENST00000566417.5 ENSP00000457335.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000566417.5Link to Ensembl Protein Viewer:ENSP00000457335.1Re-query CCDS DB by Nucleotide ID:ENST00000566417Re-query CCDS DB by Protein ID:ENSP00000457335
Original member Current member NCBI NM_138573.4 NP_612640.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138573.4Link to Protein Sequence:NP_612640.1Re-query CCDS DB by Nucleotide ID:NM_138573Re-query CCDS DB by Protein ID:NP_612640Link to BLAST:NP_612640.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_612640.1 115 Q8WWG1 115 100% 0 0

Chromosomal Locations for CCDS 10288.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 75943638 75943654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75955932 75956011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75961828 75961974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76009200 76009293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76011221 76011230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (348 nt):
ATGCCAACAGATCACGAAGAGCCCTGTGGTCCCAGTCACAAGTCGTTTTGCCTGAATGGGGGGCTTTGTT
ATGTGATACCTACTATTCCCAGCCCATTTTGTAGGTGCGTTGAAAACTATACAGGAGCTCGTTGTGAAGA
GGTTTTTCTCCCAGGCTCCAGCATCCAAACTAAAAGTAACCTGTTTGAAGCTTTTGTGGCATTGGCGGTC
CTAGTAACACTTATCATTGGAGCCTTCTACTTCCTTTGCAGGAAAGGCCACTTTCAGAGAGCCAGTTCAG
TCCAGTATGATATCAACCTGGTAGAGACGAGCAGTACCAGTGCCCACCACAGTCATGAACAACACTGA

Translation (115 aa):
MPTDHEEPCGPSHKSFCLNGGLCYVIPTIPSPFCRCVENYTGARCEEVFLPGSSIQTKSNLFEAFVALAV
LVTLIIGAFYFLCRKGHFQRASSVQYDINLVETSSTSAHHSHEQH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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