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Report for CCDS86669.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86669.1 Public Homo sapiens 18 POLI 24 110 108 CCDS HistoryNCBI Gene:11201Re-query CCDS DB by CCDS ID:86669.1Re-query CCDS DB by GeneID:11201See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86669.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000406285.7 ENSP00000385196.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000406285.7Link to Ensembl Protein Viewer:ENSP00000385196.3Re-query CCDS DB by Nucleotide ID:ENST00000406285Re-query CCDS DB by Protein ID:ENSP00000385196
Original member Current member NCBI NM_001351613.1 NP_001338542.1 Accepted alive Link to Nucleotide Sequence:NM_001351613.1Link to Protein Sequence:NP_001338542.1Re-query CCDS DB by Nucleotide ID:NM_001351613Re-query CCDS DB by Protein ID:NP_001338542Link to BLAST:NP_001338542.1

Chromosomal Locations for CCDS 86669.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 54269547 54269661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54271360 54271485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54273926 54274090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54277703 54277855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54282837 54283015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54283922 54284013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54287281 54287411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54291833 54292038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54293649 54294467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1986 nt):
ATGGAGAAGCTGGGGGTGGAGCCGGAGGAGGAAGGCGGCGGCGACGACGACGAGGAAGACGCCGAGGCCT
GGGCCATGGAACTGGCGGACGTGGGGGCGGCAGCCAGCTCGCAGGGAGTTCATGATCAAGTGTTGCCCAC
ACCAAATGCTTCATCCAGAGTCATAGTACATGTGGATCTGGATTGCTTTTATGCACAAGTAGAAATGATC
TCAAATCCAGAGCTAAAAGACAAACCTTTAGGGGTTCAACAGAAATATTTGGTGGTTACCTGCAACTATG
AAGCTAGGAAACTTGGAGTTAAGAAACTTATGAATGTCAGAGATGCAAAAGAAAAGTGTCCACAGTTGGT
ATTAGTTAATGGAGAAGACCTGACCCGCTACAGAGAAATGTCTTATAAGGTTACAGAATTACTGGAAGAA
TTTAGTCCAGTTGTTGAGAGACTTGGATTTGATGAAAATTTTGTGGATCTAACAGAAATGGTTGAGAAGA
GACTACAGCAGCTGCAAAGTGATGAACTTTCTGCGGTGACTGTGTCGGGTCATGTATACAATAATCAGTG
TATTGGCTATAAAACTGCCAAATGTCTTGAAGCACTGGGTATCAATAGTGTGCGTGATCTCCAAACCTTT
TCACCCAAAATTTTAGAAAAAGAATTAGGAATTTCAGTTGCTCAGCGTATCCAAAAGCTCAGTTTTGGAG
AGGATAACTCCCCTGTGATACTCTCAGGACCACCTCAGTCCTTTAGTGAAGAAGATTCATTTAAAAAATG
TTCATCTGAAGTTGAAGCTAAAAATAAGATTGAAGAACTACTTGCTAGTCTTTTAAACAGAGTATGCCAA
GATGGAAGGAAGCCTCATACAGTGAGATTAATAATCCGTCGGTATTCCTCTGAGAAGCACTATGGTCGTG
AGAGTCGTCAGTGCCCTATTCCTTCACATGTAATTCAGAAATTAGGGACAGGAAATTATGATGTGATGAC
CCCAATGGTTGATATACTTATGAAACTTTTTCGAAATATGGTGAATGTGAAGATGCCATTTCACCTTACC
CTTCTAAGTGTGTGCTTCTGCAACCTTAAAGCACTAAATACTGCTAAGAAAGGGCTTATTGATTATTATT
TAATGCCATCATTATCAACTACTTCACGCTCTGGCAAGCACAGTTTTAAAATGAAAGACACTCATATGGA
AGATTTTCCCAAAGACAAAGAAACAAACCGGGATTTCCTACCAAGTGGAAGAATTGAAAGTACAAGAACT
AGGGAGTCTCCACTAGATACCACAAATTTTTCTAAAGAAAAAGACATTAATGAATTCCCACTCTGTTCAC
TTCCTGAAGGTGTTGACCAAGAAGTCTTCAAGCAGCTTCCAGTAGATATTCAAGAAGAAATCCTTTCTGG
AAAATCTAGGGAAAAATTTCAAGGGAAAGGAAGTGTGAGTTGTCCATTACATGCCTCTAGAGGAGTATTA
TCTTTCTTTTCTAAAAAACAAATGCAAGATATTCCCATAAATCCTAGAGATCATTTATCCAGTAGCAAAC
AGGTATCCTCTGTATCTCCTTGTGAACCGGGAACATCAGGCTTTAATAGCAGTAGTTCTTCTTACATGTC
TAGCCAAAAGGATTATTCATATTATTTAGATAATAGATTAAAAGATGAACGAATAAGTCAAGGACCTAAA
GAACCTCAAGGATTCCACTTTACAAATTCAAACCCTGCTGTGTCTGCTTTTCATTCATTTCCAAACTTGC
AGAGTGAGCAACTTTTCTCCAGAAACCACACTACAGATAGCCATAAGCAAACAGTAGCAACAGACTCTCA
TGAAGGACTTACAGAAAATAGAGAGCCAGATTCTGTTGATGAGAAAATTACTTTCCCTTCTGACATTGAT
CCTCAAGTTTTCTATGAACTACCAGAAGCAGTACAAAAGGAACTGCTGGCAGAGTGGAAGAGAGCAGGAT
CAGATTTCCACATTGGACATAAATAA

Translation (661 aa):
MEKLGVEPEEEGGGDDDEEDAEAWAMELADVGAAASSQGVHDQVLPTPNASSRVIVHVDLDCFYAQVEMI
SNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMNVRDAKEKCPQLVLVNGEDLTRYREMSYKVTELLEE
FSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNNQCIGYKTAKCLEALGINSVRDLQTF
SPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNKIEELLASLLNRVCQ
DGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMPFHLT
LLSVCFCNLKALNTAKKGLIDYYLMPSLSTTSRSGKHSFKMKDTHMEDFPKDKETNRDFLPSGRIESTRT
RESPLDTTNFSKEKDINEFPLCSLPEGVDQEVFKQLPVDIQEEILSGKSREKFQGKGSVSCPLHASRGVL
SFFSKKQMQDIPINPRDHLSSSKQVSSVSPCEPGTSGFNSSSSSYMSSQKDYSYYLDNRLKDERISQGPK
EPQGFHFTNSNPAVSAFHSFPNLQSEQLFSRNHTTDSHKQTVATDSHEGLTENREPDSVDEKITFPSDID
PQVFYELPEAVQKELLAEWKRAGSDFHIGHK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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