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Report for CCDS10031.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10031.1 Public Homo sapiens 15 CHRM5 24 110 108 CCDS HistoryNCBI Gene:1133Re-query CCDS DB by CCDS ID:10031.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10031.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000383263.7 ENSP00000372750.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000383263.7Link to Ensembl Protein Viewer:ENSP00000372750.5Re-query CCDS DB by Nucleotide ID:ENST00000383263Re-query CCDS DB by Protein ID:ENSP00000372750
Original member Current member EBI ENST00000557872.1 ENSP00000453745.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000557872.1Link to Ensembl Protein Viewer:ENSP00000453745.1Re-query CCDS DB by Nucleotide ID:ENST00000557872Re-query CCDS DB by Protein ID:ENSP00000453745
Original member Current member NCBI NM_001320917.2 NP_001307846.1 Accepted alive Link to Nucleotide Sequence:NM_001320917.2Link to Protein Sequence:NP_001307846.1Re-query CCDS DB by Nucleotide ID:NM_001320917Re-query CCDS DB by Protein ID:NP_001307846Link to BLAST:NP_001307846.1
Original member Current member NCBI NM_012125.4 NP_036257.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012125.4Link to Protein Sequence:NP_036257.1Re-query CCDS DB by Nucleotide ID:NM_012125Re-query CCDS DB by Protein ID:NP_036257Link to BLAST:NP_036257.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001307846.1 532 P08912 532 100% 0 0
NP_036257.1 532 P08912 532 100% 0 0

Chromosomal Locations for CCDS 10031.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 34062718 34064316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1599 nt):
ATGGAAGGGGATTCTTACCACAATGCAACCACCGTCAATGGCACCCCAGTAAATCACCAGCCTTTGGAAC
GC
CACAGGTTGTGGGAAGTCATCACCATTGCAGCTGTGACTGCTGTGGTAAGCCTGATCACCATTGTGGG
C
AATGTCTTGGTCATGATCTCCTTCAAAGTCAACAGCCAGCTCAAGACAGTTAACAACTATTACCTGCTC
AGC
TTAGCCTGTGCAGATCTCATCATTGGAATCTTCTCCATGAACCTCTACACCACCTACATCCTCATGG
GA
CGCTGGGCTCTCGGGAGTCTGGCTTGTGACCTTTGGCTTGCACTGGACTACGTGGCCAGCAACGCTTC
T
GTCATGAACCTTCTGGTGATCAGTTTTGACCGTTACTTTTCCATCACAAGACCCTTGACATATCGGGCC
AAG
CGTACTCCGAAAAGGGCTGGCATCATGATTGGCTTGGCCTGGCTGATCTCCTTCATCCTCTGGGCCC
CA
GCAATCCTCTGCTGGCAGTACTTGGTTGGGAAGCGGACAGTTCCACTGGATGAGTGCCAGATCCAGTT
T
CTCTCTGAGCCCACCATCACTTTTGGCACTGCCATTGCTGCCTTCTACATCCCTGTTTCTGTCATGACC
ATC
CTCTACTGTCGAATCTACCGGGAAACAGAGAAGCGAACCAAGGACCTGGCTGACCTCCAGGGTTCTG
AC
TCTGTGACCAAAGCTGAGAAGAGAAAGCCAGCTCATAGGGCTCTGTTCAGATCCTGCTTGCGCTGTCC
T
CGACCCACCCTGGCCCAGCGGGAAAGGAACCAGGCCTCCTGGTCATCCTCCCGCAGGAGCACCTCCACC
ACT
GGGAAGCCATCCCAAGCCACTGGCCCAAGCGCCAATTGGGCCAAAGCTGAGCAGCTCACCACCTGTA
GC
AGCTACCCTTCCTCAGAGGATGAGGACAAGCCCGCCACTGACCCTGTCCTCCAAGTGGTCTACAAGAG
T
CAGGGTAAGGAAAGCCCAGGGGAAGAATTCAGTGCTGAAGAGACTGAGGAAACTTTTGTGAAAGCTGAA
ACT
GAAAAAAGTGACTATGACACCCCAAACTACCTTCTGTCTCCAGCAGCTGCTCATAGACCCAAGAGTC
AG
AAATGTGTGGCCTATAAGTTCCGATTGGTGGTAAAAGCTGACGGGAACCAGGAGACCAACAATGGCTG
T
CACAAGGTGAAAATCATGCCCTGCCCCTTCCCAGTGGCCAAGGAACCTTCAACGAAAGGCCTCAATCCC
AAC
CCCAGCCATCAAATGACCAAACGAAAGAGAGTGGTCCTAGTCAAAGAGAGGAAAGCAGCCCAGACAC
TG
AGTGCCATTCTCCTGGCCTTCATCATCACATGGACCCCGTATAACATCATGGTCCTGGTTTCTACCTT
C
TGTGACAAGTGTGTCCCAGTCACCCTGTGGCACTTGGGCTATTGGTTGTGCTATGTCAATAGCACTGTC
AAC
CCCATCTGCTATGCCCTCTGCAACAGAACCTTCAGGAAGACCTTTAAGATGCTGCTTCTCTGCCGAT
GG
AAAAAGAAAAAAGTGGAAGAGAAGTTGTACTGGCAGGGGAACAGCAAGCTACCCTGA


Translation (532 aa):
MEGDSYHNATTVNGTPVNHQPLERHRLWEVITIAAVTAVVSLITIVGNVLVMISFKVNSQLKTVNNYYLL
S
LACADLIIGIFSMNLYTTYILMGRWALGSLACDLWLALDYVASNASVMNLLVISFDRYFSITRPLTYRA
K
RTPKRAGIMIGLAWLISFILWAPAILCWQYLVGKRTVPLDECQIQFLSEPTITFGTAIAAFYIPVSVMT
I
LYCRIYRETEKRTKDLADLQGSDSVTKAEKRKPAHRALFRSCLRCPRPTLAQRERNQASWSSSRRSTST
T
GKPSQATGPSANWAKAEQLTTCSSYPSSEDEDKPATDPVLQVVYKSQGKESPGEEFSAEETEETFVKAE
T
EKSDYDTPNYLLSPAAAHRPKSQKCVAYKFRLVVKADGNQETNNGCHKVKIMPCPFPVAKEPSTKGLNP
N
PSHQMTKRKRVVLVKERKAAQTLSAILLAFIITWTPYNIMVLVSTFCDKCVPVTLWHLGYWLCYVNSTV
N
PICYALCNRTFRKTFKMLLLCRWKKKKVEEKLYWQGNSKLP




Links Key
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 Genome Browser Links:   Ensembl Genome Browser
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