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Report for CCDS10351.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10351.1 Public Homo sapiens 15 RHCG 24 110 108 CCDS HistoryNCBI Gene:51458Re-query CCDS DB by CCDS ID:10351.1Re-query CCDS DB by GeneID:51458See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10351.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000268122.9 ENSP00000268122.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000268122.9Link to Ensembl Protein Viewer:ENSP00000268122.4Re-query CCDS DB by Nucleotide ID:ENST00000268122Re-query CCDS DB by Protein ID:ENSP00000268122
Original member Current member NCBI NM_001321041.2 NP_001307970.1 Accepted alive Link to Nucleotide Sequence:NM_001321041.2Link to Protein Sequence:NP_001307970.1Re-query CCDS DB by Nucleotide ID:NM_001321041Re-query CCDS DB by Protein ID:NP_001307970Link to BLAST:NP_001307970.1
Original member Current member NCBI NM_016321.3 NP_057405.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016321.3Link to Protein Sequence:NP_057405.1Re-query CCDS DB by Nucleotide ID:NM_016321Re-query CCDS DB by Protein ID:NP_057405Link to BLAST:NP_057405.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001307970.1 479 Q9UBD6 479 100% 0 0
NP_057405.1 479 Q9UBD6 479 100% 0 0

Chromosomal Locations for CCDS 10351.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 89472735 89472863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89476755 89476828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89477082 89477206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89477517 89477653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89477837 89477974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89479322 89479488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89480261 89480408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89483067 89483217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89486799 89486985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89496361 89496544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1440 nt):
ATGGCCTGGAACACCAACCTCCGCTGGCGGCTGCCGCTCACCTGCCTGCTCCTGCAGGTGATTATGGTGA
TTCTCTTCGGGGTGTTCGTGCGCTACGACTTCGAGGCCGACGCCCACTGGTGGTCAGAGAGGACGCACAA
GAACTTGAGCGACATGGAGAACGAATTCTACTATCGCTACCCAAGCTTCCAGGACGTGCACGTGATGGTC
TTCGTGGGCTTCGGCTTCCTCATGACTTTCCTGCAGCGCTACGGCTTCAGCGCCGTGGGCTTCAACTTCC
TGTTGGCAGCCTTCGGCATCCAGTGGGCGCTGCTCATGCAGGGCTGGTTCCACTTCTTACAAGACCGCTA
CATCGTCGTGGGCGTGGAGAACCTCATCAACGCTGACTTCTGCGTGGCCTCTGTCTGCGTGGCCTTTGGG
GCAGTTCTGGGTAAAGTCAGCCCCATTCAGCTGCTCATCATGACTTTCTTCCAAGTGACCCTCTTCGCTG
TGAATGAGTTCATTCTCCTTAACCTGCTAAAGGTGAAGGATGCAGGAGGCTCCATGACCATCCACACATT
TGGCGCCTACTTTGGGCTCACAGTGACCCGGATCCTCTACCGACGCAACCTAGAGCAGAGCAAGGAGAGA
CAGAATTCTGTGTACCAGTCGGACCTCTTTGCCATGATTGGCACCCTCTTCCTGTGGATGTACTGGCCCA
GCTTCAACTCAGCCATATCCTACCATGGGGACAGCCAGCACCGAGCCGCCATCAACACCTACTGCTCCTT
GGCAGCCTGCGTGCTTACCTCGGTGGCAATATCCAGTGCCCTGCACAAGAAGGGCAAGCTGGACATGGTG
CACATCCAGAATGCCACGCTCGCAGGAGGGGTGGCCGTGGGTACCGCTGCTGAGATGATGCTCATGCCTT
ACGGTGCCCTCATCATCGGCTTCGTCTGCGGCATCATCTCCACCCTGGGTTTTGTATACCTGACCCCATT
CCTGGAGTCCCGGCTGCACATCCAGGACACATGTGGCATTAACAATCTGCATGGCATTCCTGGCATCATA
GGCGGCATCGTGGGTGCTGTGACAGCGGCCTCCGCCAGCCTTGAAGTCTATGGAAAAGAAGGGCTTGTCC
ATTCCTTTGACTTTCAAGGTTTCAACGGGGACTGGACCGCAAGAACACAGGGAAAGTTCCAGATTTATGG
TCTCTTGGTGACCCTGGCCATGGCCCTGATGGGTGGCATCATTGTGGGGCTCATTTTGAGATTACCATTC
TGGGGACAACCTTCAGATGAGAACTGCTTTGAGGATGCGGTCTACTGGGAGATGCCTGAAGGGAACAGCA
CTGTCTACATCCCTGAGGACCCCACCTTCAAGCCCTCAGGACCCTCAGTACCCTCAGTACCCATGGTGTC
CCCACTACCCATGGCTTCCTCGGTACCCTTGGTACCCTAG

Translation (479 aa):
MAWNTNLRWRLPLTCLLLQVIMVILFGVFVRYDFEADAHWWSERTHKNLSDMENEFYYRYPSFQDVHVMV
FVGFGFLMTFLQRYGFSAVGFNFLLAAFGIQWALLMQGWFHFLQDRYIVVGVENLINADFCVASVCVAFG
AVLGKVSPIQLLIMTFFQVTLFAVNEFILLNLLKVKDAGGSMTIHTFGAYFGLTVTRILYRRNLEQSKER
QNSVYQSDLFAMIGTLFLWMYWPSFNSAISYHGDSQHRAAINTYCSLAACVLTSVAISSALHKKGKLDMV
HIQNATLAGGVAVGTAAEMMLMPYGALIIGFVCGIISTLGFVYLTPFLESRLHIQDTCGINNLHGIPGII
GGIVGAVTAASASLEVYGKEGLVHSFDFQGFNGDWTARTQGKFQIYGLLVTLAMALMGGIIVGLILRLPF
WGQPSDENCFEDAVYWEMPEGNSTVYIPEDPTFKPSGPSVPSVPMVSPLPMASSVPLVP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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