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    RPS26P25 ribosomal protein S26 pseudogene 25 [ Homo sapiens (human) ]

    Gene ID: 728937, updated on 10-Oct-2023

    Summary

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    Official Symbol
    RPS26P25provided by HGNC
    Official Full Name
    ribosomal protein S26 pseudogene 25provided by HGNC
    Primary source
    HGNC:HGNC:35730
    See related
    AllianceGenome:HGNC:35730
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    RPS26_10_512
    Summary
    Although this locus has an open reading frame that could produce a protein of the same or nearly the same size as that of the RPS26 gene, there is no evidence of transcription. The locus is thus being annotated as a pseudogene.[provided by RefSeq, Feb 2009]
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    Genomic context

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    Location:
    4q26
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (113213977..113214420, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (116522696..116523139, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (114135133..114135576, complement)

    Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene ankyrin 2 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:114066308-114066916 Neighboring gene microRNA 1243 Neighboring gene microRNA 8082 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:114158073-114158257 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:114199559-114199733 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:114214071-114214590 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:114213551-114214070 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_72140 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21836 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr4:114274931-114276130 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr4:114276560-114277759 Neighboring gene NANOG hESC enhancer GRCh37_chr4:114306634-114307363 Neighboring gene uncharacterized LOC105377374 Neighboring gene Sharpr-MPRA regulatory region 2369 Neighboring gene RNA, 7SL, cytoplasmic 184, pseudogene Neighboring gene RNA, U1 small nuclear 138, pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. [Cloning cDNA of human S26 ribosomal protein and determination of its primary structure]. Filipenko ML, et al. Bioorg Khim, 1994 Jun. PMID 7945460
    2. The human ribosomal protein genes: sequencing and comparative analysis of 73 genes. Yoshihama M, et al. Genome Res, 2002 Mar. PMID 11875025, Free PMC Article
    3. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_010542.3 

      Range
      101..544
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

      Range
      113213977..113214420 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060928.1 Alternate T2T-CHM13v2.0

      Range
      116522696..116523139 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001093731.2: Suppressed sequence

      Description
      NM_001093731.2: This RefSeq was permanently suppressed because there is no convincing evidence this locus is transcribed.
    Nucleotide Protein
    Heading Accession and Version

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