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    Tmem160 transmembrane protein 160 [ Mus musculus (house mouse) ]

    Gene ID: 69094, updated on 30-Apr-2024

    Summary

    Official Symbol
    Tmem160provided by MGI
    Official Full Name
    transmembrane protein 160provided by MGI
    Primary source
    MGI:MGI:1916344
    See related
    Ensembl:ENSMUSG00000019158 AllianceGenome:MGI:1916344
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1810008O21Rik
    Summary
    Located in mitochondrion. Orthologous to human TMEM160 (transmembrane protein 160). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Broad expression in adrenal adult (RPKM 208.8), duodenum adult (RPKM 160.5) and 24 other tissues See more
    Orthologs
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    Genomic context

    Location:
    7 9.13 cM; 7 A2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (16186867..16189415)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (16452779..16455496)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 57781 Neighboring gene SUMO1 activating enzyme subunit 1 Neighboring gene STARR-seq mESC enhancer starr_18132 Neighboring gene STARR-positive B cell enhancer ABC_E4898 Neighboring gene STARR-seq mESC enhancer starr_18133 Neighboring gene zinc finger CCCH-type containing 4 Neighboring gene STARR-positive B cell enhancer ABC_E347 Neighboring gene neuronal PAS domain protein 1 Neighboring gene nuclear encoded rRNA 5S 151 Neighboring gene STARR-positive B cell enhancer ABC_E10425 Neighboring gene Rho GTPase activating protein 35 Neighboring gene ribosomal protein L7A pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrial inner membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in mitochondrion HDA PubMed 

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001418927.1NP_001405856.1  transmembrane protein 160 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC164880
    2. NM_026938.2NP_081214.1  transmembrane protein 160 isoform 1 precursor

      See identical proteins and their annotated locations for NP_081214.1

      Status: VALIDATED

      Source sequence(s)
      AC164880
      Consensus CDS
      CCDS20849.1
      UniProtKB/Swiss-Prot
      Q3TKH9, Q9D938
      Related
      ENSMUSP00000019302.9, ENSMUST00000019302.10

    RNA

    1. NR_184858.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC164880
      Related
      ENSMUST00000209536.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      16186867..16189415
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)