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    CSGALNACT2P2 CSGALNACT2 pseudogene 2 [ Homo sapiens (human) ]

    Gene ID: 107178920, updated on 10-Oct-2023

    Summary

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    Official Symbol
    CSGALNACT2P2provided by HGNC
    Official Full Name
    CSGALNACT2 pseudogene 2provided by HGNC
    Primary source
    HGNC:HGNC:55034
    See related
    AllianceGenome:HGNC:55034
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    Location:
    Xq22.3
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (106327534..106329585)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (104761448..104763499)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (105570761..105572812)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene CTDSPL2 pseudogene 2 Neighboring gene PWWP domain containing 3B Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29827 Neighboring gene nucleosome assembly protein 1 like 4 pseudogene 2 Neighboring gene serpin family A member 7 pseudogene 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    General gene information

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    Other Names

    • chondroitin sulfate N-acetylgalactosaminyltransferase 2 pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_046710.2 

      Range
      100..2151
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      106327534..106329585
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      104761448..104763499
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases