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    RNU6-1047P RNA, U6 small nuclear 1047, pseudogene [ Homo sapiens (human) ]

    Gene ID: 106481511, updated on 10-Oct-2023

    Summary

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    Official Symbol
    RNU6-1047Pprovided by HGNC
    Official Full Name
    RNA, U6 small nuclear 1047, pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:48010
    See related
    Ensembl:ENSG00000201288 AllianceGenome:HGNC:48010
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    Location:
    3q21.3
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (127240968..127241074, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (129973442..129973548, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (126959811..126959917, complement)

    Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:126915318-126916262 Neighboring gene PRR23 family member E Neighboring gene ReSE screen-validated silencer GRCh37_chr3:126926904-126927070 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20451 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20452 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20453 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20454 Neighboring gene PRR23 family member E2, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14685 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:126983520-126984020 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:126984021-126984521 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:126992945-126993459 Neighboring gene uncharacterized LOC124906281 Neighboring gene NANOG hESC enhancer GRCh37_chr3:126995796-126996297 Neighboring gene proline rich 20G

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_043742.1 

      Range
      101..207
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

      Range
      127240968..127241074 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060927.1 Alternate T2T-CHM13v2.0

      Range
      129973442..129973548 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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