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    RNU6-348P RNA, U6 small nuclear 348, pseudogene [ Homo sapiens (human) ]

    Gene ID: 106481289, updated on 10-Oct-2023

    Summary

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    Official Symbol
    RNU6-348Pprovided by HGNC
    Official Full Name
    RNA, U6 small nuclear 348, pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:47311
    See related
    Ensembl:ENSG00000207114 AllianceGenome:HGNC:47311
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    Location:
    3q26.31
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (171504245..171504351, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (174288181..174288287, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (171222034..171222140, complement)

    Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene TRAF2 and NCK interacting kinase Neighboring gene uncharacterized LOC124906303 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14893 Neighboring gene uncharacterized LOC102724479 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:171178895-171179395 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14894 Neighboring gene CRISPRi-validated cis-regulatory element chr3.4898 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr3:171206252-171207451 Neighboring gene Sharpr-MPRA regulatory region 12788 Neighboring gene MT-CO1 pseudogene 58 Neighboring gene phospholipase D1 Neighboring gene small nucleolar RNA U13

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_043988.1 

      Range
      101..207
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

      Range
      171504245..171504351 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060927.1 Alternate T2T-CHM13v2.0

      Range
      174288181..174288287 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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