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    SKILA SKI-like proto-oncogene a [ Latimeria chalumnae (coelacanth) ]

    Gene ID: 102356007, updated on 2-May-2024

    Summary

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    Gene symbol
    SKILA
    Gene description
    SKI-like proto-oncogene a
    See related
    Ensembl:ENSLACG00000014707
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Latimeria chalumnae
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
    Also known as
    SKIL
    Orthologs
    zebrafish all
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    Genomic context

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    Location:
    chromosome: 8
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 8 NC_088146.1 (7618443..7648718)
    101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819146.1 (1082386..1101069, complement)

    Chromosome 8 - NC_088146.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102357080 Neighboring gene protein kinase C, iota Neighboring gene claudin 11b Neighboring gene solute carrier family 7 member 14

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables SMAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of BMP signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ski-like protein
    Names
    SKI like proto-oncogene
    SKI-like oncogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fLatCha1.pri

    Genomic

    1. NC_088146.1 Reference fLatCha1.pri

      Range
      7618443..7648718
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005992737.3 → XP_005992799.1  ski-like protein

      See identical proteins and their annotated locations for XP_005992799.1

      UniProtKB/TrEMBL
      H3B477
      Related
      ENSLACP00000016698.1
      Conserved Domains (4) summary
      pfam02437
      Location:144 → 243
      Ski_Sno; SKI/SNO/DAC family
      pfam08782
      Location:270 → 362
      c-SKI_SMAD_bind; c-SKI Smad4 binding domain
      cd16269
      Location:677 → 688
      GBP_C; coiled coil [structural motif]
      cl20817
      Location:556 → 710
      GBP_C; Guanylate-binding protein, C-terminal domain

    2. XM_005992736.3 → XP_005992798.1  ski-like protein

      See identical proteins and their annotated locations for XP_005992798.1

      UniProtKB/TrEMBL
      H3B477
      Conserved Domains (4) summary
      pfam02437
      Location:144 → 243
      Ski_Sno; SKI/SNO/DAC family
      pfam08782
      Location:270 → 362
      c-SKI_SMAD_bind; c-SKI Smad4 binding domain
      cd16269
      Location:677 → 688
      GBP_C; coiled coil [structural motif]
      cl20817
      Location:556 → 710
      GBP_C; Guanylate-binding protein, C-terminal domain

    3. XM_064562242.1 → XP_064418312.1  ski-like protein

    Nucleotide Protein
    Heading Accession and Version

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