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    RPS3AP39 RPS3A pseudogene 39 [ Homo sapiens (human) ]

    Gene ID: 730993, updated on 10-Oct-2023

    Summary

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    Official Symbol
    RPS3AP39provided by HGNC
    Official Full Name
    RPS3A pseudogene 39provided by HGNC
    Primary source
    HGNC:HGNC:35490
    See related
    Ensembl:ENSG00000237226 AllianceGenome:HGNC:35490
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    RPS3A_18_1114
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    Genomic context

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    See RPS3AP39 in Genome Data Viewer
    Location:
    11p15.4
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (3549695..3550543, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (3595162..3596010, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (3570925..3571773, complement)

    Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101927708 Neighboring gene uncharacterized LOC107984301 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr11:3533122-3533622 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr11:3533623-3534123 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:3555923-3556422 Neighboring gene small nuclear ribonucleoprotein polypeptide C pseudogene 5 Neighboring gene serine/arginine-rich splicing factor SR45-like Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4309 Neighboring gene ribosomal protein S24 pseudogene 14 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3080 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr11:3604611-3605252 Neighboring gene VPS51 pseudogene 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Markers

    Other Names

    • ribosomal protein S3a pseudogene 39

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_010582.1 

      Range
      101..949
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

      Range
      3549695..3550543 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060935.1 Alternate T2T-CHM13v2.0

      Range
      3595162..3596010 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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