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    LOC125312414 uncharacterized LOC125312414 [ Homo sapiens (human) ]

    Gene ID: 125312414, updated on 10-Oct-2023

    Summary

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    Gene symbol
    LOC125312414
    Gene description
    uncharacterized LOC125312414
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See LOC125312414 in Genome Data Viewer
    Location:
    1q24.2
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (168400191..168495640, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (167752512..167850756, complement)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene dynactin subunit 5 pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:168356076-168356657 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr1:168356658-168357238 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr1:168357239-168357820 Neighboring gene microRNA 557 Neighboring gene uncharacterized LOC100505918 Neighboring gene OCT4 hESC enhancer GRCh37_chr1:168397241-168397782 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1544 Neighboring gene uncharacterized LOC101928565 Neighboring gene QRSL1 pseudogene 1 Neighboring gene MPRA-validated peak443 silencer Neighboring gene MPRA-validated peak444 silencer Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr1:168479196-168480395 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr1:168481645-168482844 Neighboring gene ribosomal protein L7a pseudogene 19 Neighboring gene X-C motif chemokine ligand 2 Neighboring gene ribosomal protein L7a pseudogene 21 Neighboring gene X-C motif chemokine ligand 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_176084.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL022100, AL023755

    2. NR_176085.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL022100, AL023755

    3. NR_176086.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL022100, AL023755

    4. NR_176087.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL022100, AL023755

    5. NR_176088.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL022100, AL023755

    6. NR_176089.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL022100, AL023755

    7. NR_176090.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL022100, AL023755

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      168400191..168495640 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      167752512..167850756 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases