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    RNU6-1222P RNA, U6 small nuclear 1222, pseudogene [ Homo sapiens (human) ]

    Gene ID: 106480100, updated on 10-Oct-2023

    Summary

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    Official Symbol
    RNU6-1222Pprovided by HGNC
    Official Full Name
    RNA, U6 small nuclear 1222, pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:48185
    See related
    Ensembl:ENSG00000207345 AllianceGenome:HGNC:48185
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See RNU6-1222P in Genome Data Viewer
    Location:
    6q24.3
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (148278672..148278778)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (149474864..149474970)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (148599808..148599914)

    Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene sterile alpha motif domain containing 5 Neighboring gene uncharacterized LOC105378044 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:148225800-148226300 Neighboring gene uncharacterized LOC124901423 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr6:148467567-148468766 Neighboring gene NANOG hESC enhancer GRCh37_chr6:148495187-148495773 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:148573377-148573878 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:148573879-148574378 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:148585683-148586236 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:148612147-148612648 Neighboring gene SAM and SH3 domain containing 1 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:148628353-148629039 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:148652682-148653673 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:148655656-148656645 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:148662621-148663200 Neighboring gene Sharpr-MPRA regulatory region 8239 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr6:148668049-148668557 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:148669576-148670085 Neighboring gene MPRA-validated peak6206 silencer Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:148687682-148688558 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:148688559-148689434 Neighboring gene Sharpr-MPRA regulatory region 6687 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:148766834-148767334 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:148773672-148774208 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:148775249-148775748 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:148834032-148834830 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:148834831-148835628 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:148837963-148838463 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:148841275-148841814 Neighboring gene cytochrome P450 family 51 subfamily A member 1 pseudogene 3 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:148854137-148854638 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:148854639-148855138 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17651 Neighboring gene SNRPE pseudogene 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_044712.1 

      Range
      101..207
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

      Range
      148278672..148278778
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060930.1 Alternate T2T-CHM13v2.0

      Range
      149474864..149474970
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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