U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    STX5 syntaxin 5 [ Cercocebus atys (sooty mangabey) ]

    Gene ID: 105577533, updated on 13-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    STX5
    Gene description
    syntaxin 5
    See related
    Ensembl:ENSCATG00000033087
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cercocebus atys
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See STX5 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012005046.1 (11243753..11270556)

    NW_012005046.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105577529 Neighboring gene 60S ribosomal protein L9 pseudogene Neighboring gene WD repeat domain 74 Neighboring gene nuclear RNA export factor 1 Neighboring gene transmembrane protein 223

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_012005046.1 Unplaced Scaffold Reference Caty_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables SNAP receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables SNARE binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle docking IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle fusion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of SNARE complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endomembrane system IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    syntaxin-5

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Caty_1.0

    Genomic

    1. NW_012005046.1 Reference Caty_1.0

      Range
      11243753..11270556
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012042019.1 → XP_011897409.1  syntaxin-5 isoform X1

      See identical proteins and their annotated locations for XP_011897409.1

      UniProtKB/TrEMBL
      A0A2K5M069, A0A2K5M079
      Related
      ENSCATP00000018583.1, ENSCATT00000042761.1
      Conserved Domains (3) summary
      COG5325
      Location:182 → 324
      COG5325; t-SNARE complex subunit, syntaxin [Intracellular trafficking and secretion]
      cd15844
      Location:266 → 338
      SNARE_syntaxin5; SNARE motif of syntaxin 5
      pfam11416
      Location:53 → 74
      Syntaxin-5_N; Syntaxin-5 N-terminal, Sly1p-binding domain

    2. XM_012042020.1 → XP_011897410.1  syntaxin-5 isoform X2

      See identical proteins and their annotated locations for XP_011897410.1

      Conserved Domains (2) summary
      cd15844
      Location:170 → 242
      SNARE_syntaxin5; SNARE motif of syntaxin 5
      cl26014
      Location:86 → 228
      SynN; Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may ...
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.