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    RNA5SP489 RNA, 5S ribosomal pseudogene 489 [ Homo sapiens (human) ]

    Gene ID: 100873731, updated on 10-Oct-2023

    Summary

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    Official Symbol
    RNA5SP489provided by HGNC
    Official Full Name
    RNA, 5S ribosomal pseudogene 489provided by HGNC
    Primary source
    HGNC:HGNC:43389
    See related
    Ensembl:ENSG00000238627 AllianceGenome:HGNC:43389
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    RN5S489
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    Genomic context

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    See RNA5SP489 in Genome Data Viewer
    Location:
    21q21.2
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 21 NC_000021.9 (25202207..25202315)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 21 NC_060945.1 (23559977..23560085)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 21 NC_000021.8 (26574521..26574629)

    Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1692 Neighboring gene MIA SH3 domain ER export factor 2 pseudogene Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr21:26452976-26454175 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr21:26479627-26480826 Neighboring gene RN7SK pseudogene 236 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_61844 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18303 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr21:26701419-26702618 Neighboring gene ribosomal protein L13a pseudogene 7 Neighboring gene long intergenic non-protein coding RNA 158 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18304

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Other Names

    • RNA, 5S ribosomal 489

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_033287.1 

      Range
      101..209
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000021.9 Reference GRCh38.p14 Primary Assembly

      Range
      25202207..25202315
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060945.1 Alternate T2T-CHM13v2.0

      Range
      23559977..23560085
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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