A human RNA polymerase II transcription termination factor is a SWI2/SNF2 family member

J Biol Chem. 1998 Oct 2;273(40):25541-4. doi: 10.1074/jbc.273.40.25541.

Abstract

We obtained protein sequence information from Drosophila factor 2, an ATP-dependent RNA polymerase II transcription termination factor, and discovered that it was identical to a SWI2/SNF2 family member called lodestar. Portions of putative human and Caenorhabditis elegans homologues were found in the sequence data bases and a complete cDNA for the human factor was generated using polymerase chain reaction techniques. Recombinant human factor 2 was produced in a baculovirus expression system, purified, and characterized. Similar to the authentic Drosophila factor, the human factor displayed a strong double-stranded DNA-dependent ATPase activity that was inhibited by single-stranded DNA and exhibited RNA polymerase II termination activity. Both factors were able to work on elongation complexes from either species. We discuss the mechanism of termination by factor 2 and the implications for the role of factor 2 in cellular activities.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Adenosine Triphosphatases / metabolism
  • Animals
  • Caenorhabditis elegans / metabolism
  • Cloning, Molecular
  • DNA Helicases*
  • DNA-Binding Proteins / chemistry
  • Databases, Factual
  • Drosophila / metabolism
  • Humans
  • Nuclear Proteins*
  • RNA Polymerase II / genetics*
  • Recombinant Proteins / chemistry
  • Sequence Analysis, DNA
  • Transcription Factors / chemistry*

Substances

  • DNA-Binding Proteins
  • Nuclear Proteins
  • Recombinant Proteins
  • SMARCA1 protein, human
  • SMARCA2 protein, human
  • Transcription Factors
  • RNA Polymerase II
  • Adenosine Triphosphatases
  • SMARCA4 protein, human
  • DNA Helicases

Associated data

  • GENBANK/AF073771