Incorporation of the guanosine triphosphate analogs 8-oxo-dGTP and 8-NH2-dGTP by reverse transcriptases and mammalian DNA polymerases

J Biol Chem. 1997 Feb 28;272(9):5892-8. doi: 10.1074/jbc.272.9.5892.

Abstract

We have measured the efficiencies of utilization of 8-oxo-dGTP and 8-NH2-dGTP by human immunodeficiency virus type 1 and murine leukemia virus reverse transcriptases and compared them to those of DNA polymerases alpha and beta. Initially, we carried out primer extension reactions in the presence of dGTP or a dGTP analog and the remaining three dNTPs using synthetic DNA and RNA templates. These assays revealed that, in general, 8-NH2-dGTP is incorporated and extended more efficiently than 8-oxo-dGTP by all enzymes tested. Second, we determined rate constants for the incorporation of each analog opposite a template cytidine residue using steady state single nucleotide extension kinetics. Our results demonstrated the following. 1) Both reverse transcriptases incorporate the nucleotide analogs; discrimination against their incorporation is a function primarily of Km or Vmax depending on the analog and the enzyme. 2) Discrimination against the analogs is more stringent with the DNA template than with a homologous RNA template. 3) Polymerase alpha exhibits a mixed kinetic phenotype, with a large discrimination against 8-oxo-dGTP but a comparatively higher preference for 8-NH2-dGTP. 4) Polymerase beta incorporates both analogs efficiently; there is no discrimination with respect to Km and a significantly lower discrimination with respect to Vmax when compared with the other polymerases.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • DNA Polymerase II / metabolism
  • Deoxyguanine Nucleotides / metabolism*
  • HIV Reverse Transcriptase / metabolism
  • Humans
  • Kinetics
  • Leukemia Virus, Murine / enzymology
  • Mutagens / metabolism*
  • RNA-Directed DNA Polymerase / metabolism*
  • Templates, Genetic

Substances

  • 8-amino-2-deoxyguanosine triphosphate
  • Deoxyguanine Nucleotides
  • Mutagens
  • 8-oxodeoxyguanosine triphosphate
  • deoxyguanosine triphosphate
  • HIV Reverse Transcriptase
  • RNA-Directed DNA Polymerase
  • DNA Polymerase II