Cloning of a cDNA encoding a human protein which binds a sequence in the c-myc gene similar to the interferon-stimulated response element

Gene. 1994 Aug 5;145(2):267-72. doi: 10.1016/0378-1119(94)90018-3.

Abstract

A human cDNA clone encoding a c-myc promoter-binding protein (IRLB) was selected by screening a human fibroblast lambda gt11 phage library with the hexamer oligodeoxyribonucleotide (oligo) 5'-GGCGGGAAAAAGAACGGA, corresponding to the protein-binding element of human c-myc similar to the interferon-stimulated response element (ISRE). The lambda gt11 phage clone, encoding a fusion protein which bound the probe oligo, was used to create an strain of Escherichia coli. The deduced amino-acid sequence of the cloned protein contains a putative alpha-helix which is expected to act as the DNA-binding domain. DNase footprinting analysis and oligo-binding specificity assays showed that the cloned factor recognizes the ISRE-like element of the P2 promoter region of human c-myc.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Blotting, Northern
  • Blotting, Southern
  • Cloning, Molecular
  • DNA, Complementary / genetics
  • DNA-Binding Proteins / biosynthesis
  • DNA-Binding Proteins / genetics*
  • Escherichia coli / genetics
  • Genes, myc*
  • Humans
  • Molecular Sequence Data
  • Protein Binding
  • Protein Structure, Secondary
  • Recombinant Proteins / biosynthesis
  • Regulatory Sequences, Nucleic Acid*
  • Sequence Analysis, DNA
  • Sequence Homology, Nucleic Acid

Substances

  • DENND4A protein, human
  • DNA, Complementary
  • DNA-Binding Proteins
  • Recombinant Proteins

Associated data

  • GENBANK/X63417