Base incorporation and extension at a site-specific ethenocytosine by Escherichia coli DNA polymerase I Klenow fragment

Mutat Res. 1994 Jan 16;304(2):265-9. doi: 10.1016/0027-5107(94)90219-4.

Abstract

Ethenocytosine (epsilon C) is a highly mutagenic exocyclic DNA lesion induced by carcinogens vinyl chloride and urethane. We have examined base incorporation and extension at a site-specific epsilon C residue by a quantitative gel electrophoretic assay using an exonuclease-deficient version of Escherichia coli DNA polymerase I (Klenow fragment) as the model enzyme. The data show that the KM for incorporation of adenine or thymine opposite epsilon C by is about 5 orders of magnitude higher than that for the incorporation of guanine opposite normal cytosine. The KM for base extension past epsilon C:A and epsilon C:T pairs is 1-2 orders of magnitude higher than that observed for a C:G pair. Although adenine misinsertion is favored over that of thymine, base extension occurs more readily when the base incorporated opposite epsilon C is thymine.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Alkylating Agents / metabolism
  • Alkylating Agents / toxicity
  • Base Composition
  • Base Sequence
  • Cytosine / analogs & derivatives*
  • Cytosine / chemistry
  • Cytosine / metabolism
  • Cytosine / toxicity
  • DNA / chemistry
  • DNA / metabolism*
  • DNA Damage*
  • DNA Polymerase I / genetics*
  • DNA Polymerase I / metabolism
  • Escherichia coli / enzymology
  • Escherichia coli / genetics
  • Molecular Sequence Data
  • Mutagenesis, Site-Directed*
  • Mutagens / metabolism*
  • Mutagens / toxicity
  • Oligodeoxyribonucleotides / metabolism
  • Templates, Genetic

Substances

  • 3,N(4)-ethenocytosine
  • Alkylating Agents
  • Mutagens
  • Oligodeoxyribonucleotides
  • Cytosine
  • DNA
  • DNA Polymerase I