Replacement synthesis labeling of DNA molecules in vitro using the Escherichia coli exonuclease III/DNA polymerase I enzyme pair

Anal Biochem. 1984 Aug 15;141(1):33-7. doi: 10.1016/0003-2697(84)90421-4.

Abstract

In vitro labeling of DNA molecules using the Escherichia coli exonuclease III/DNA polymerase I enzyme pair has been examined as an alternative to existing methods of replacement synthesis labeling. It is shown that exonuclease III is able to act in a common restriction enzyme buffer [50 mM Tris (pH 8.0), 10 mM MgCl2, 50 mM NaCl] to produce a population of base-paired primer:template molecules which decrease uniformly in single-strand length with time. After heat inactivation of the exonuclease III and in the presence of radiolabeled deoxynucleotides the polymerase I reaction faithfully resynthesizes full-length molecules, asymmetrically labeled to high specific activity.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Base Composition
  • Chemical Phenomena
  • Chemistry
  • DNA / biosynthesis*
  • DNA Polymerase I / metabolism*
  • Escherichia coli / enzymology*
  • Exodeoxyribonucleases / metabolism*
  • Hot Temperature
  • Kinetics
  • Plasmids

Substances

  • DNA
  • DNA Polymerase I
  • Exodeoxyribonucleases
  • exodeoxyribonuclease III