Structure of large fragment of Escherichia coli DNA polymerase I complexed with dTMP

Nature. 1985;313(6005):762-6. doi: 10.1038/313762a0.

Abstract

The 3.3-A resolution crystal structure of the large proteolytic fragment of Escherichia coli DNA polymerase I complexed with deoxythymidine monophosphate consists of two domains, the smaller of which binds zinc-deoxythymidine monophosphate. The most striking feature of the larger domain is a deep crevice of the appropriate size and shape for binding double-stranded B-DNA. A flexible subdomain may allow the enzyme to surround completely the DNA substrate, thereby allowing processive nucleotide polymerization without enzyme dissociation.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Binding Sites
  • Cations
  • Crystallization
  • DNA / metabolism
  • DNA Polymerase I*
  • DNA-Binding Proteins
  • Escherichia coli / enzymology*
  • Models, Molecular
  • Peptide Fragments
  • Protein Conformation
  • Thymine Nucleotides / metabolism
  • X-Ray Diffraction

Substances

  • Cations
  • DNA-Binding Proteins
  • Peptide Fragments
  • Thymine Nucleotides
  • DNA
  • DNA Polymerase I