SET7 methylates the deubiquitinase OTUB1 at Lys 122 to impair its binding to E2 enzyme UBC13 and relieve its suppressive role on ferroptosis

J Biol Chem. 2023 Apr;299(4):103054. doi: 10.1016/j.jbc.2023.103054. Epub 2023 Feb 22.

Abstract

The deubiquitinating enzyme OTUB1 possesses canonical deubiquitinase (DUB) activity and noncanonical, catalytic-independent activity, which has been identified as an essential regulator of diverse physiological processes. Posttranslational modifications of OTUB1 affect both its DUB activity and its noncanonical activity of binding to the E2 ubiquitin-conjugation enzyme UBC13, but further investigation is needed to characterize the full inventory of modifications to OTUB1. Here, we demonstrate that SET7, a lysine monomethylase, directly interacts with OTUB1 to catalyze OTUB1 methylation at lysine 122. This modification does not affect DUB activity of OTUB1 but impairs its noncanonical activity, binding to UBC13. Moreover, we found using cell viability analysis and intracellular reactive oxygen species assay that SET7-mediated methylation of OTUB1 relieves its suppressive role on ferroptosis. Notably, the methylation-mimic mutant of OTUB1 not only loses the ability to bind to UBC13 but also relieves its suppressive role on Tert-Butyl hydroperoxide-induced cell death and Cystine starvation/Erastin-induced cellular reactive oxygen species. Collectively, our data identify a novel modification of OTUB1 that is critical for inhibiting its noncanonical activity.

Keywords: OTUB1; SET7; UBC13; ferroptosis; methylation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Deubiquitinating Enzymes* / metabolism
  • Ferroptosis*
  • Histone-Lysine N-Methyltransferase* / metabolism
  • Humans
  • Lysine / metabolism
  • Protein Binding
  • Reactive Oxygen Species / metabolism
  • Ubiquitin-Conjugating Enzymes*
  • Ubiquitination

Substances

  • Deubiquitinating Enzymes
  • Lysine
  • Reactive Oxygen Species
  • SETD7 protein, human
  • Histone-Lysine N-Methyltransferase
  • OTUB1 protein, human
  • UBE2N protein, human
  • Ubiquitin-Conjugating Enzymes