LncRNA FIRRE stimulates PTBP1-induced Smurf2 decay, stabilizes B-cell receptor, and promotes the development of diffuse large B-cell lymphoma

Hematol Oncol. 2022 Oct;40(4):554-566. doi: 10.1002/hon.3004. Epub 2022 May 5.

Abstract

Sustained expression of B-cell receptor (BCR) critically contributes to the development of diffuse large B-cell lymphoma (DLBCL). However, little is known on the mechanism regulating BCR expression. In the present study, we explored the biological significance of functional intergenic repeating RNA element (FIRRE) in DLBCL and its regulation on BCR. Functional impacts of FIRRE on cell viability, transformation, and apoptosis were examined by MTT, colony formation, and flow cytometry, respectively. The interaction between FIRRE and polypyrimidine tract binding protein 1 (PTBP1) was identified by RNA pull-down and verified using RNA immunoprecipitation (RIP) assays. The effects of FIRRE and PTBP1 on Smurf2 mRNA were examined by RIP, RNA pull-down, and mRNA stability assays. Smurf2-mediated BCR ubiquitination was investigated using co-immunoprecipitation, ubiquitination, and protein stability assays. In vivo, xenograft models were used to assess the impacts of targeting FIRRE on DLBCL growth. FIRRE was specifically up-regulated in and essentially maintained multiple malignant behaviors of BCR-dependent DLBCL cells. Through the interaction with PTBP1, FIRRE promoted the mRNA decay of Smurf2, a ubiquitin ligase for the degradation BCR protein. Targeting FIRRE was sufficient to regulat Smurf2 and BCR expressions and inhibit DLBCL malignancy both in vivo and in vitro. FIRRE-PTBP1 interaction, by simulating Smurf2 mRNA decay and stabilizing BCR, promotes the development of DLBCL. Consequently, targeting this signaling mechanism may provide therapeutic benefits for DLBCL.

Keywords: B-cell receptor; DLBCL; FIRRE; PTBP1; Smurf2.

MeSH terms

  • Cell Line, Tumor
  • Heterogeneous-Nuclear Ribonucleoproteins* / genetics
  • Humans
  • Ligases / metabolism
  • Lymphoma, Large B-Cell, Diffuse* / pathology
  • Polypyrimidine Tract-Binding Protein* / genetics
  • RNA, Long Noncoding* / genetics
  • RNA, Messenger
  • Receptors, Antigen, B-Cell* / metabolism
  • Ubiquitin-Protein Ligases* / genetics
  • Ubiquitin-Protein Ligases* / metabolism

Substances

  • Heterogeneous-Nuclear Ribonucleoproteins
  • PTBP1 protein, human
  • RNA, Long Noncoding
  • RNA, Messenger
  • Receptors, Antigen, B-Cell
  • long noncoding RNA Firre, human
  • Polypyrimidine Tract-Binding Protein
  • SMURF2 protein, human
  • Ubiquitin-Protein Ligases
  • Ligases