Crystal structure of the nucleotide-metabolizing enzyme NTPDase4

Protein Sci. 2020 Oct;29(10):2054-2061. doi: 10.1002/pro.3926. Epub 2020 Sep 3.

Abstract

The ecto-nucleoside triphosphate diphosphohydrolases (NTPDases) are a family of enzymes found on the cell surface and in the lumen of certain organelles, that are major regulators of purinergic signaling. Their intracellular roles, however, have not been clearly defined. NTPDase4 (UDPase, ENTPD4) is a Golgi protein potentially involved in nucleotide recycling as part of protein glycosylation, and is also found in lysosomes, where its purpose is unknown. To further our understanding of NTPDase4 function, we determined its crystal structure. The enzyme adopts a wide open, inactive conformation. Differences in the nucleotide-binding site relative to its homologs could account for its substrate selectivity. The putative membrane-interacting loop of cell-surface NTPDases is drastically altered in NTPDase4, potentially affecting its interdomain dynamics at the Golgi membrane.

Keywords: ENTPD4; NTPDase4; UDPase; X-ray crystallography; nucleotide metabolism.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Crystallography, X-Ray
  • Humans
  • Protein Domains
  • Protein Structure, Secondary
  • Pyrophosphatases / chemistry*
  • Sf9 Cells
  • Spodoptera

Substances

  • Pyrophosphatases
  • ENTPD4 protein, human

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