Assorted dysfunctions of endosomal alkali cation/proton exchanger SLC9A6 variants linked to Christianson syndrome

J Biol Chem. 2020 May 15;295(20):7075-7095. doi: 10.1074/jbc.RA120.012614. Epub 2020 Apr 10.

Abstract

Genetic screening has identified numerous variants of the endosomal solute carrier family 9 member A6 (SLC9A6)/(Na+,K+)/H+ exchanger 6 (NHE6) gene that cause Christianson syndrome, a debilitating X-linked developmental disorder associated with a range of neurological, somatic, and behavioral symptoms. Many of these variants cause complete loss of NHE6 expression, but how subtler missense substitutions or nonsense mutations that partially truncate its C-terminal cytoplasmic regulatory domain impair NHE6 activity and endosomal function are poorly understood. Here, we describe the molecular and cellular consequences of six unique mutations located in the N-terminal cytoplasmic segment (A9S), the membrane ion translocation domain (L188P and G383D), and the C-terminal regulatory domain (E547*, R568Q, and W570*) of human NHE6 that purportedly cause disease. Using a heterologous NHE6-deficient cell expression system, we show that the biochemical, catalytic, and cellular properties of the A9S and R568Q variants were largely indistinguishable from those of the WT transporter, which obscured their disease significance. By contrast, the L188P, G383D, E547*, and W570* mutants exhibited variable deficiencies in biosynthetic post-translational maturation, membrane sorting, pH homeostasis in recycling endosomes, and cargo trafficking, and they also triggered apoptosis. These findings broaden our understanding of the molecular dysfunctions of distinct NHE6 variants associated with Christianson syndrome.

Keywords: apoptosis; endocytosis; endosome; membrane transport; neurological disease; pH regulation; protein sorting; sodium-proton exchange; structure–function.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Substitution
  • Animals
  • Ataxia* / genetics
  • Ataxia* / metabolism
  • Cricetinae
  • Endosomes* / chemistry
  • Endosomes* / genetics
  • Endosomes* / metabolism
  • Epilepsy* / genetics
  • Epilepsy* / metabolism
  • Genetic Diseases, X-Linked* / genetics
  • Genetic Diseases, X-Linked* / metabolism
  • HeLa Cells
  • Humans
  • Hydrogen-Ion Concentration
  • Intellectual Disability* / genetics
  • Intellectual Disability* / metabolism
  • Microcephaly* / genetics
  • Microcephaly* / metabolism
  • Mutation, Missense*
  • Ocular Motility Disorders* / genetics
  • Ocular Motility Disorders* / metabolism
  • Protein Domains
  • Sodium-Hydrogen Exchangers* / chemistry
  • Sodium-Hydrogen Exchangers* / genetics
  • Sodium-Hydrogen Exchangers* / metabolism

Substances

  • SLC9A6 protein, human
  • Sodium-Hydrogen Exchangers

Supplementary concepts

  • Mental Retardation, X-Linked, Syndromic, Christianson Type

Associated data

  • PDB/5bz3