Genome-Wide CRISPR Screening Identifies JAK1 Deficiency as a Mechanism of T-Cell Resistance

Front Immunol. 2019 Feb 19:10:251. doi: 10.3389/fimmu.2019.00251. eCollection 2019.

Abstract

Somatic gene mutations play a critical role in immune evasion by tumors. However, there is limited information on genes that confer immunotherapy resistance in melanoma. To answer this question, we established a whole-genome knockout B16/ovalbumin cell line by clustered regularly interspaced short palindromic repeats (CRISPR)/CRISPR-associated protein-9 nuclease technology, and determined by in vivo adoptive OT-I T-cell transfer and an in vitro OT-I T-cell-killing assay that Janus kinase (JAK)1 deficiency mediates T-cell resistance via a two-step mechanism. Loss of JAK1 reduced JAK-Signal transducer and activator of transcription signaling in tumor cells-resulting in tumor resistance to the T-cell effector molecule interferon-and suppressed T-cell activation by impairing antigen presentation. These findings provide a novel method for exploring immunotherapy resistance in cancer and identify JAK1 as potential therapeutic target for melanoma treatment.

Keywords: CRISPR/Cas9; JAK1 deficiency; T-cell resistance; immunotherapy; melanoma.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adoptive Transfer / methods
  • Animals
  • Antigen Presentation / immunology
  • CRISPR-Cas Systems / immunology*
  • Cell Line, Tumor
  • Clustered Regularly Interspaced Short Palindromic Repeats / immunology*
  • Gene Editing / methods
  • Genome / immunology*
  • Genome-Wide Association Study / methods
  • Janus Kinase 1 / deficiency*
  • Janus Kinase 1 / immunology
  • Melanoma / immunology
  • Melanoma, Experimental / immunology
  • Mice
  • Mice, Inbred C57BL
  • T-Lymphocytes / immunology*

Substances

  • Jak1 protein, mouse
  • Janus Kinase 1