The Truncated Isoform of the Receptor Tyrosine Kinase ALK Generated by Alternative Transcription Initiation (ALKATI) Induces Chromatin Structural Changes in the Nucleus in a Kinase Activity-Dependent Manner

Biol Pharm Bull. 2017;40(11):1968-1975. doi: 10.1248/bpb.b17-00548.

Abstract

Anaplastic lymphoma kinase (ALK) is a receptor-type tyrosine kinase that promotes cell growth upon stimulation with ligands such as midkine and pleiotrophin. Recently, a truncated isoform of ALK was identified in a variety of tumors. This isoform is expressed from a novel ALK transcript initiated from a de novo alternative transcription initiation (ATI) site in ALK intron 19 (referred to as ALKATI). ALKATI, which consists of only the intracellular kinase domain, localizes to the nucleus as well as the cytoplasm. However, its nuclear role is unknown. In this study, we determined that ALKATI promoted chromatin structural changes in the nucleus in a kinase activity-dependent manner. We found that expression of ALKATI increased the level of the heterochromatin marker Lys9 tri-methylated histone H3. In addition, we demonstrated that ALKATI phosphorylated the nuclear protein A-kinase anchoring protein 8 (AKAP8) and altered its subcellular localization from the insoluble fraction to the soluble fraction. These results suggest that ALKATI induces chromatin structural changes and heterochromatinization through phosphorylation of AKAP8 in the nucleus.

Keywords: A-kinase anchoring protein 8; alternative transcription initiation; anaplastic lymphoma kinase; chromatin structural change; heterochromatinization; nuclear tyrosine kinase.

MeSH terms

  • A Kinase Anchor Proteins / genetics
  • A Kinase Anchor Proteins / metabolism*
  • Alternative Splicing
  • Anaplastic Lymphoma Kinase
  • Cell Nucleus / genetics
  • Cell Nucleus / metabolism*
  • HeLa Cells
  • Heterochromatin / genetics
  • Heterochromatin / metabolism*
  • Histones / metabolism
  • Humans
  • Introns / genetics
  • Isoenzymes / genetics
  • Isoenzymes / metabolism
  • Phosphorylation
  • Protein Domains / genetics
  • Receptor Protein-Tyrosine Kinases / genetics
  • Receptor Protein-Tyrosine Kinases / metabolism*
  • Transcription Initiation Site

Substances

  • A Kinase Anchor Proteins
  • AKAP8 protein, human
  • Heterochromatin
  • Histones
  • Isoenzymes
  • ALK protein, human
  • Anaplastic Lymphoma Kinase
  • Receptor Protein-Tyrosine Kinases