WIG1 is crucial for AGO2-mediated ACOT7 mRNA silencing via miRNA-dependent and -independent mechanisms

Nucleic Acids Res. 2017 Jun 20;45(11):6894-6910. doi: 10.1093/nar/gkx307.

Abstract

RNA-binding proteins (RBPs) are involved in mRNA splicing, maturation, transport, translation, storage and turnover. Here, we identified ACOT7 mRNA as a novel target of human WIG1. ACOT7 mRNA decay was triggered by the microRNA miR-9 in a WIG1-dependent manner via classic recruitment of Argonaute 2 (AGO2). Interestingly, AGO2 was also recruited to ACOT7 mRNA in a WIG1-dependent manner in the absence of miR-9, which indicates an alternative model whereby WIG1 controls AGO2-mediated gene silencing. The WIG1-AGO2 complex attenuated translation initiation via an interaction with translation initiation factor 5B (eIF5B). These results were confirmed using a WIG1 tethering system based on the MS2 bacteriophage coat protein and a reporter construct containing an MS2-binding site, and by immunoprecipitation of WIG1 and detection of WIG1-associated proteins using liquid chromatography-tandem mass spectrometry. We also identified WIG1-binding motifs using photoactivatable ribonucleoside-enhanced crosslinking and immunoprecipitation analyses. Altogether, our data indicate that WIG1 governs the miRNA-dependent and the miRNA-independent recruitment of AGO2 to lower the stability of and suppress the translation of ACOT7 mRNA.

MeSH terms

  • 3' Untranslated Regions
  • Argonaute Proteins / physiology*
  • Base Sequence
  • Binding Sites
  • Carrier Proteins / physiology*
  • Eukaryotic Initiation Factors / metabolism
  • HCT116 Cells
  • HEK293 Cells
  • Humans
  • Inverted Repeat Sequences
  • MCF-7 Cells
  • MicroRNAs / physiology*
  • Nuclear Proteins / physiology*
  • Protein Binding
  • Protein Biosynthesis
  • Protein Domains
  • RNA Interference*
  • RNA Stability
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism*
  • RNA-Binding Proteins

Substances

  • 3' Untranslated Regions
  • AGO2 protein, human
  • Argonaute Proteins
  • Carrier Proteins
  • Eukaryotic Initiation Factors
  • MIRN92 microRNA, human
  • MicroRNAs
  • Nuclear Proteins
  • RNA, Messenger
  • RNA-Binding Proteins
  • ZMAT3 protein, human
  • eukaryotic initiation factor-5B