Tumor protein D52 expression is post-transcriptionally regulated by T-cell intercellular antigen (TIA) 1 and TIA-related protein via mRNA stability

Biochem J. 2017 May 4;474(10):1669-1687. doi: 10.1042/BCJ20160942.

Abstract

Although tumor protein D52 (TPD52) family proteins were first identified nearly 20 years ago, their molecular regulatory mechanisms remain unclear. Therefore, we investigated the post-transcriptional regulation of TPD52 family genes. An RNA immunoprecipitation (RIP) assay showed the potential binding ability of TPD52 family mRNAs to several RNA-binding proteins, and an RNA degradation assay revealed that TPD52 is subject to more prominent post-transcriptional regulation than are TPD53 and TPD54. We subsequently focused on the 3'-untranslated region (3'-UTR) of TPD52 as a cis-acting element in post-transcriptional gene regulation. Several deletion mutants of the 3'-UTR of TPD52 mRNA were constructed and ligated to the 3'-end of a reporter green fluorescence protein gene. An RNA degradation assay revealed that a minimal cis-acting region, located in the 78-280 region of the 5'-proximal region of the 3'-UTR, stabilized the reporter mRNA. Biotin pull-down and RIP assays revealed specific binding of the region to T-cell intracellular antigen 1 (TIA-1) and TIA-1-related protein (TIAR). Knockdown of TIA-1/TIAR decreased not only the expression, but also the stability of TPD52 mRNA; it also decreased the expression and stability of the reporter gene ligated to the 3'-end of the 78-280 fragment. Stimulation of transforming growth factor-β and epidermal growth factor decreased the binding ability of these factors, resulting in decreased mRNA stability. These results indicate that the 78-280 fragment and TIA-1/TIAR concordantly contribute to mRNA stability as a cis-acting element and trans-acting factor(s), respectively. Thus, we here report the specific interactions between these elements in the post-transcriptional regulation of the TPD52 gene.

Keywords: RNA-binding proteins; TIA-1; TIAR; TPD52; mRNA stability; post-transcriptional regulation.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • 3' Untranslated Regions
  • Cell Line, Tumor
  • Cells, Cultured
  • Gene Expression Regulation, Neoplastic*
  • Gene Knockdown Techniques
  • Genes, Reporter
  • Humans
  • Immunoprecipitation
  • Neoplasm Proteins / antagonists & inhibitors
  • Neoplasm Proteins / chemistry
  • Neoplasm Proteins / genetics
  • Neoplasm Proteins / metabolism*
  • Peptide Fragments / antagonists & inhibitors
  • Peptide Fragments / chemistry
  • Peptide Fragments / genetics
  • Peptide Fragments / metabolism
  • Poly(A)-Binding Proteins / antagonists & inhibitors
  • Poly(A)-Binding Proteins / genetics
  • Poly(A)-Binding Proteins / metabolism*
  • RNA Interference
  • RNA Stability
  • RNA, Messenger / antagonists & inhibitors
  • RNA, Messenger / chemistry
  • RNA, Messenger / metabolism*
  • RNA, Neoplasm / antagonists & inhibitors
  • RNA, Neoplasm / chemistry
  • RNA, Neoplasm / metabolism*
  • RNA-Binding Proteins / antagonists & inhibitors
  • RNA-Binding Proteins / genetics
  • RNA-Binding Proteins / metabolism*
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / metabolism
  • Response Elements*
  • Sequence Deletion
  • T-Cell Intracellular Antigen-1

Substances

  • 3' Untranslated Regions
  • Neoplasm Proteins
  • Peptide Fragments
  • Poly(A)-Binding Proteins
  • RNA, Messenger
  • RNA, Neoplasm
  • RNA-Binding Proteins
  • Recombinant Proteins
  • T-Cell Intracellular Antigen-1
  • TIA1 protein, human
  • TPD52 protein, human
  • TPD52L1 protein, human
  • TPD52L2 protein, human
  • TIAL1 protein, human