The nuclear poly(A) binding protein of mammals, but not of fission yeast, participates in mRNA polyadenylation

RNA. 2017 Apr;23(4):473-482. doi: 10.1261/rna.057026.116. Epub 2017 Jan 17.

Abstract

The nuclear poly(A) binding protein (PABPN1) has been suggested, on the basis of biochemical evidence, to play a role in mRNA polyadenylation by strongly increasing the processivity of poly(A) polymerase. While experiments in metazoans have tended to support such a role, the results were not unequivocal, and genetic data show that the S. pombe ortholog of PABPN1, Pab2, is not involved in mRNA polyadenylation. The specific model in which PABPN1 increases the rate of poly(A) tail elongation has never been examined in vivo. Here, we have used 4-thiouridine pulse-labeling to examine the lengths of newly synthesized poly(A) tails in human cells. Knockdown of PABPN1 strongly reduced the synthesis of full-length tails of ∼250 nucleotides, as predicted from biochemical data. We have also purified S. pombe Pab2 and the S. pombe poly(A) polymerase, Pla1, and examined their in vitro activities. Whereas PABPN1 strongly increases the activity of its cognate poly(A) polymerase in vitro, Pab2 was unable to stimulate Pla1 to any significant extent. Thus, in vitro and in vivo data are consistent in supporting a role of PABPN1 but not S. pombe Pab2 in the polyadenylation of mRNA precursors.

Keywords: mRNA polyadenylation; poly(A) binding protein; poly(A) polymerase; pre-mRNA 3′; processing.

MeSH terms

  • Cloning, Molecular
  • Escherichia coli / genetics
  • Escherichia coli / metabolism
  • Gene Expression
  • Gene Expression Regulation
  • HEK293 Cells
  • Humans
  • Isoenzymes / genetics
  • Isoenzymes / metabolism
  • Poly A / biosynthesis
  • Poly A / genetics*
  • Poly(A)-Binding Protein I / genetics*
  • Poly(A)-Binding Protein I / metabolism
  • Poly(A)-Binding Proteins / genetics*
  • Poly(A)-Binding Proteins / metabolism
  • Polyadenylation
  • Polynucleotide Adenylyltransferase / genetics*
  • Polynucleotide Adenylyltransferase / metabolism
  • RNA Precursors / genetics*
  • RNA Precursors / metabolism
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Schizosaccharomyces / genetics*
  • Schizosaccharomyces / metabolism
  • Schizosaccharomyces pombe Proteins / genetics*
  • Schizosaccharomyces pombe Proteins / metabolism
  • Species Specificity
  • Substrate Specificity

Substances

  • Isoenzymes
  • PABPN1 protein, human
  • Pab2 protein, S pombe
  • Poly(A)-Binding Protein I
  • Poly(A)-Binding Proteins
  • RNA Precursors
  • RNA, Messenger
  • Recombinant Proteins
  • Schizosaccharomyces pombe Proteins
  • Poly A
  • Polynucleotide Adenylyltransferase