A deletion polymorphism in the RIZ gene is associated with increased progression of imatinib treated chronic myeloid leukemia patients

Leuk Lymphoma. 2017 Jul;58(7):1694-1701. doi: 10.1080/10428194.2016.1251589. Epub 2016 Nov 10.

Abstract

RIZ1 encodes a retinoblastoma (Rb)-interacting zinc finger protein, is commonly lost or expressed at reduced levels in cancer cells. The RIZ1 gene locus commonly undergoes LOH in many cancers. Here, we analyzed Proline insertion-deletion polymorphism at amino acid position 704 in the RIZ1 gene and its association with CML. The RIZ1 pro-704 LOH genotypes were determined by AS-PCR in 100 CML patients among which 50 were in CP-CML, 25 in AP-CML, and 25 in BC-CML. Pro704 ins/del polymorphism (LOH) was detected in 27% CML patients. Proline ins-ins homozygosity, del-del homozygosity and ins-del heterozygosity was detected in 9%, 18%, and 73% CML patients compared with 3%, 3%, and 94% in healthy controls, respectively (p < .0003). A four-fold increased risk was found to be associated del-del genotype. We found a statistically significant association between RIZ1 LOH and stage (p > .01) and hematological resistance (p > .001). However, there were no correlations found with other clinical parameters like age, gender, thrombocytopia, type of BCR-ABL, and molecular response. Our findings suggest that proline 704 del-del homozygosity phenotype can play an important role in progression of CML.

Keywords: Basic biology; drug resistance; genetic and other predisposing conditions.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Aged
  • Alleles
  • Case-Control Studies
  • DNA-Binding Proteins / genetics*
  • Disease Progression
  • Female
  • Fusion Proteins, bcr-abl / genetics
  • Genotype
  • Histone-Lysine N-Methyltransferase / genetics*
  • Humans
  • INDEL Mutation
  • Imatinib Mesylate / administration & dosage
  • Imatinib Mesylate / adverse effects
  • Imatinib Mesylate / therapeutic use
  • Leukemia, Myelogenous, Chronic, BCR-ABL Positive / drug therapy
  • Leukemia, Myelogenous, Chronic, BCR-ABL Positive / genetics*
  • Leukemia, Myelogenous, Chronic, BCR-ABL Positive / pathology*
  • Male
  • Middle Aged
  • Neoplasm Staging
  • Nuclear Proteins / genetics*
  • Polymorphism, Genetic*
  • Sequence Deletion*
  • Transcription Factors / genetics*
  • Translocation, Genetic
  • Treatment Outcome

Substances

  • DNA-Binding Proteins
  • Nuclear Proteins
  • Transcription Factors
  • Imatinib Mesylate
  • Histone-Lysine N-Methyltransferase
  • PRDM2 protein, human
  • Fusion Proteins, bcr-abl