TET1 modulates H4K16 acetylation by controlling auto-acetylation of hMOF to affect gene regulation and DNA repair function

Nucleic Acids Res. 2017 Jan 25;45(2):672-684. doi: 10.1093/nar/gkw919. Epub 2016 Oct 12.

Abstract

The Ten Eleven Translocation 1 (TET1) protein is a DNA demethylase that regulates gene expression through altering statue of DNA methylation. However, recent studies have demonstrated that TET1 could modulate transcriptional expression independent of its DNA demethylation activity; yet, the detailed mechanisms underlying TET1's role in such transcriptional regulation remain not well understood. Here, we uncovered that Tet1 formed a chromatin complex with histone acetyltransferase Mof and scaffold protein Sin3a in mouse embryonic stem cells by integrative genomic analysis using publicly available ChIP-seq data sets and a series of in vitro biochemical studies in human cell lines. Mechanistically, the TET1 facilitated chromatin affinity and enzymatic activity of hMOF against acetylation of histone H4 at lysine 16 via preventing auto-acetylation of hMOF, to regulate expression of the downstream genes, including DNA repair genes. We found that Tet1 knockout MEF cells exhibited an accumulation of DNA damage and genomic instability and Tet1 deficient mice were more sensitive to x-ray exposure. Taken together, our findings reveal that TET1 forms a complex with hMOF to modulate its function and the level of H4K16Ac ultimately affect gene expression and DNA repair.

MeSH terms

  • Acetylation
  • Animals
  • Cell Line
  • Chromatin Immunoprecipitation
  • DNA Repair*
  • DNA-Binding Proteins / metabolism*
  • Gene Expression Regulation*
  • Genomic Instability
  • Genomics / methods
  • High-Throughput Nucleotide Sequencing
  • Histone Acetyltransferases / metabolism*
  • Histones / metabolism*
  • Humans
  • Mice
  • Mice, Knockout
  • Mouse Embryonic Stem Cells / metabolism
  • Proto-Oncogene Proteins / metabolism*
  • Repressor Proteins / metabolism
  • Sin3 Histone Deacetylase and Corepressor Complex

Substances

  • DNA-Binding Proteins
  • Histones
  • Proto-Oncogene Proteins
  • Repressor Proteins
  • SIN3A transcription factor
  • TET1 protein, mouse
  • Histone Acetyltransferases
  • Sin3 Histone Deacetylase and Corepressor Complex

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