Identification of a region in the coiled-coil domain of Smc3 that is essential for cohesin activity

Nucleic Acids Res. 2016 Jul 27;44(13):6309-17. doi: 10.1093/nar/gkw539. Epub 2016 Jun 15.

Abstract

The cohesin complex plays an important role in sister chromatin cohesion. Cohesin's core is composed of two structural maintenance of chromosome (SMC) proteins, called Smc1 and Smc3. SMC proteins are built from a globular hinge domain, a rod-shaped domain composed of long anti-parallel coiled-coil (CC), and a second globular adenosine triphosphatase domain called the head. The functions of both head and hinge domains have been studied extensively, yet the function of the CC region remains elusive. We identified a mutation in the CC of smc3 (L217P) that disrupts the function of the protein. Cells carrying the smc3-L217P allele have a strong cohesion defect and complexes containing smc3-L217P are not loaded onto the chromosomes. However, the mutation does not affect inter-protein interactions in either the core complex or with the Scc2 loader. We show by molecular dynamics and biochemistry that wild-type Smc3 can adopt distinct conformations, and that adenosine triphosphate (ATP) induces the conformational change. The L217P mutation restricts the ability of the mutated protein to switch between the conformations. We suggest that the function of the CC is to transfer ATP binding/hydrolysis signals between the head and the hinge domains. The results provide a new insight into the mechanism of cohesin activity.

MeSH terms

  • Adenosine Triphosphate / genetics
  • Adenosine Triphosphate / metabolism
  • Cell Cycle Proteins / chemistry
  • Cell Cycle Proteins / genetics*
  • Chondroitin Sulfate Proteoglycans / chemistry
  • Chondroitin Sulfate Proteoglycans / genetics*
  • Chromatin
  • Chromosomal Proteins, Non-Histone / chemistry
  • Chromosomal Proteins, Non-Histone / genetics*
  • Cohesins
  • Humans
  • Mutation
  • Neoplasms / chemistry
  • Neoplasms / genetics*
  • Protein Conformation
  • Protein Domains / genetics
  • Protein Structure, Tertiary
  • Saccharomyces cerevisiae
  • Saccharomyces cerevisiae Proteins / chemistry
  • Saccharomyces cerevisiae Proteins / genetics*
  • Sister Chromatid Exchange / genetics

Substances

  • Cell Cycle Proteins
  • Chondroitin Sulfate Proteoglycans
  • Chromatin
  • Chromosomal Proteins, Non-Histone
  • SMC3 protein, S cerevisiae
  • SMC3 protein, human
  • Saccharomyces cerevisiae Proteins
  • structural maintenance of chromosome protein 1
  • Adenosine Triphosphate