ZRF1 mediates remodeling of E3 ligases at DNA lesion sites during nucleotide excision repair

J Cell Biol. 2016 Apr 25;213(2):185-200. doi: 10.1083/jcb.201506099. Epub 2016 Apr 18.

Abstract

Faithful DNA repair is essential to maintain genome integrity. Ultraviolet (UV) irradiation elicits both the recruitment of DNA repair factors and the deposition of histone marks such as monoubiquitylation of histone H2A at lesion sites. Here, we report how a ubiquitin E3 ligase complex specific to DNA repair is remodeled at lesion sites in the global genome nucleotide excision repair (GG-NER) pathway. Monoubiquitylation of histone H2A (H2A-ubiquitin) is catalyzed predominantly by a novel E3 ligase complex consisting of DDB2, DDB1, CUL4B, and RING1B (UV-RING1B complex) that acts early during lesion recognition. The H2A-ubiquitin binding protein ZRF1 mediates remodeling of this E3 ligase complex directly at the DNA lesion site, causing the assembly of the UV-DDB-CUL4A E3 ligase complex (DDB1-DDB2-CUL4A-RBX1). ZRF1 is an essential factor in GG-NER, and its function at damaged chromatin sites is linked to damage recognition factor XPC. Overall, the results shed light on the interplay between epigenetic and DNA repair recognition factors at DNA lesion sites.

MeSH terms

  • Cullin Proteins / metabolism
  • DNA Damage
  • DNA Repair / physiology*
  • DNA-Binding Proteins / genetics
  • DNA-Binding Proteins / metabolism
  • DNA-Binding Proteins / physiology*
  • HEK293 Cells
  • Histones / metabolism
  • Humans
  • Molecular Chaperones
  • Oncogene Proteins / genetics
  • Oncogene Proteins / metabolism
  • Oncogene Proteins / physiology*
  • Polycomb Repressive Complex 1 / metabolism
  • Polycomb Repressive Complex 1 / physiology
  • RNA-Binding Proteins
  • Ubiquitin-Protein Ligases / metabolism*
  • Ubiquitination
  • Ultraviolet Rays

Substances

  • CUL4B protein, human
  • Cullin Proteins
  • DDB1 protein, human
  • DDB2 protein, human
  • DNA-Binding Proteins
  • DNAJC2 protein, human
  • Histones
  • Molecular Chaperones
  • Oncogene Proteins
  • RNA-Binding Proteins
  • Polycomb Repressive Complex 1
  • RNF2 protein, human
  • Ubiquitin-Protein Ligases