Efflux systems in bacteria and their metabolic engineering applications

Appl Microbiol Biotechnol. 2015 Nov;99(22):9381-93. doi: 10.1007/s00253-015-6963-9. Epub 2015 Sep 12.

Abstract

The production of valuable chemicals from metabolically engineered microbes can be limited by excretion from the cell. Efflux is often overlooked as a bottleneck in metabolic pathways, despite its impact on alleviating feedback inhibition and product toxicity. In the past, it has been assumed that endogenous efflux pumps and membrane porins can accommodate product efflux rates; however, there are an increasing number of examples wherein overexpressing efflux systems is required to improve metabolite production. In this review, we highlight specific examples from the literature where metabolite export has been studied to identify unknown transporters, increase tolerance to metabolites, and improve the production capabilities of engineered bacteria. The review focuses on the export of a broad spectrum of valuable chemicals including amino acids, sugars, flavins, biofuels, and solvents. The combined set of examples supports the hypothesis that efflux systems can be identified and engineered to confer export capabilities on industrially relevant microbes.

Keywords: Efflux; Export; Metabolic engineering; Synthetic biology; Toxicity; Transporters.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.
  • Review

MeSH terms

  • Bacteria / genetics*
  • Bacteria / metabolism*
  • Biofuels
  • Dinitrocresols / metabolism
  • Escherichia coli / genetics
  • Industrial Microbiology / methods
  • Membrane Transport Proteins / metabolism
  • Metabolic Engineering / methods*
  • Metabolic Networks and Pathways
  • Systems Biology

Substances

  • Biofuels
  • Dinitrocresols
  • Membrane Transport Proteins
  • 4,6-dinitro-o-cresol