Complete Structure of an Epithelial Keratin Dimer: Implications for Intermediate Filament Assembly

PLoS One. 2015 Jul 16;10(7):e0132706. doi: 10.1371/journal.pone.0132706. eCollection 2015.

Abstract

Keratins are cytoskeletal proteins that hierarchically arrange into filaments, starting with the dimer sub-unit. They are integral to the structural support of cells, in skin, hair and nails. In skin, keratin is thought to play a critical role in conferring the barrier properties and elasticity of skin. In general, the keratin dimer is broadly described by a tri-domain structure: a head, a central rod and a tail. As yet, no atomistic-scale picture of the entire dimer structure exists; this information is pivotal for establishing molecular-level connections between structure and function in intermediate filament proteins. The roles of the head and tail domains in facilitating keratin filament assembly and function remain as open questions. To address these, we report results of molecular dynamics simulations of the entire epithelial human K1/K10 keratin dimer. Our findings comprise: (1) the first three-dimensional structural models of the complete dimer unit, comprising of the head, rod and tail domains; (2) new insights into the chirality of the rod-domain twist gained from analysis of the full domain structure; (3) evidence for tri-subdomain partitioning in the head and tail domains; and, (4) identification of the residue characteristics that mediate non-covalent contact between the chains in the dimer. Our findings are immediately applicable to other epithelial keratins, such as K8/K18 and K5/K14, and to intermediate filament proteins in general.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Disulfides / chemistry*
  • Humans
  • Hydrogen Bonding
  • Intermediate Filaments / chemistry*
  • Keratin-1 / chemistry*
  • Keratin-10 / chemistry*
  • Molecular Dynamics Simulation
  • Molecular Sequence Data
  • Protein Folding
  • Protein Multimerization*
  • Protein Structure, Secondary
  • Protein Structure, Tertiary
  • Sequence Alignment

Substances

  • Disulfides
  • KRT1 protein, human
  • KRT10 protein, human
  • Keratin-1
  • Keratin-10

Grants and funding

This work was funded by Unilever R&D. The authors gratefully acknowledge computing resource from the Centre for Scientific Computing, University of Warwick. RN was supported by a Royal Society University Research Fellowship. TRW was supported by a veski Innovation Fellowship. The Royal Society and veski had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript. Co-author Massimo G. Noro is employed by Unilever R&D. Unilever R&D provided support in the form of salary for author MGN, and MGN played an additional role in the study design, decision to publish and preparation of the manuscript. The specific role of this author is articulated in the ‘author contributions’ section.