Selenocysteine oxidation in glutathione peroxidase catalysis: an MS-supported quantum mechanics study

Free Radic Biol Med. 2015 Oct:87:1-14. doi: 10.1016/j.freeradbiomed.2015.06.011. Epub 2015 Jul 8.

Abstract

Glutathione peroxidases (GPxs) are enzymes working with either selenium or sulfur catalysis. They adopted diverse functions ranging from detoxification of H(2)O(2) to redox signaling and differentiation. The relative stability of the selenoenzymes, however, remained enigmatic in view of the postulated involvement of a highly unstable selenenic acid form during catalysis. Nevertheless, density functional theory calculations obtained with a representative active site model verify the mechanistic concept of GPx catalysis and underscore its efficiency. However, they also allow that the selenenic acid, in the absence of the reducing substrate, reacts with a nitrogen in the active site. MS/MS analysis of oxidized rat GPx4 complies with the predicted structure, an 8-membered ring, in which selenium is bound as selenenylamide to the protein backbone. The intermediate can be re-integrated into the canonical GPx cycle by glutathione, whereas, under denaturing conditions, its selenium moiety undergoes β-cleavage with formation of a dehydro-alanine residue. The selenenylamide bypass prevents destruction of the redox center due to over-oxidation of the selenium or its elimination and likely allows fine-tuning of GPx activity or alternate substrate reactions for regulatory purposes.

Keywords: DFT calculation; Glutathione peroxidases; MS/MS analysis of catalytic intermediates; Selenenylamide formation; Selenium catalysis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Catalysis
  • Glutathione / chemistry*
  • Glutathione / metabolism
  • Glutathione Peroxidase / chemistry*
  • Glutathione Peroxidase / metabolism
  • Hydrogen Peroxide / chemistry
  • Kinetics
  • Oxidation-Reduction*
  • Quantum Theory
  • Rats
  • Selenium / chemistry
  • Selenocysteine / chemistry*
  • Selenocysteine / metabolism
  • Sulfur / chemistry
  • Tandem Mass Spectrometry

Substances

  • Selenocysteine
  • Sulfur
  • Hydrogen Peroxide
  • Glutathione Peroxidase
  • Glutathione
  • Selenium