BRUCE regulates DNA double-strand break response by promoting USP8 deubiquitination of BRIT1

Proc Natl Acad Sci U S A. 2015 Mar 17;112(11):E1210-9. doi: 10.1073/pnas.1418335112. Epub 2015 Mar 2.

Abstract

The DNA damage response (DDR) is crucial for genomic integrity. BRIT1 (breast cancer susceptibility gene C terminus-repeat inhibitor of human telomerase repeat transcriptase expression), a tumor suppressor and early DDR factor, is recruited to DNA double-strand breaks (DSBs) by phosphorylated H2A histone family, member X (γ-H2AX), where it promotes chromatin relaxation by recruiting the switch/sucrose nonfermentable (SWI-SNF) chromatin remodeler to facilitate DDR. However, regulation of BRIT1 recruitment is not fully understood. The baculovirus IAP repeat (BIR)-containing ubiquitin-conjugating enzyme (BRUCE) is an inhibitor of apoptosis protein (IAP). Here, we report a non-IAP function of BRUCE in the regulation of the BRIT1-SWI-SNF DSB-response pathway and genomic stability. We demonstrate that BRIT1 is K63 ubiquitinated in unstimulated cells and that deubiquitination of BRIT1 is a prerequisite for its recruitment to DSB sites by γ-H2AX. We show mechanistically that BRUCE acts as a scaffold, bridging the ubiquitin-specific peptidase 8 (USP8) and BRIT1 in a complex to coordinate USP8-catalyzed deubiquitination of BRIT1. Loss of BRUCE or USP8 impairs BRIT1 deubiquitination, BRIT1 binding with γ-H2AX, the formation of BRIT1 DNA damage foci, and chromatin relaxation. Moreover, BRUCE-depleted cells display reduced homologous recombination repair, and BRUCE-mutant mice exhibit repair defects and genomic instability. These findings identify BRUCE and USP8 as two hitherto uncharacterized critical DDR regulators and uncover a deubiquitination regulation of BRIT1 assembly at damaged chromatin for efficient DDR and genomic stability.

Keywords: BRIT1; BRUCE; DNA DSB repair; inhibitor of apoptosis.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Animals
  • Cell Cycle Proteins
  • Cell Nucleus / metabolism
  • Chromatin / metabolism
  • Chromosomes, Mammalian / metabolism
  • Cytoskeletal Proteins
  • DNA Breaks, Double-Stranded*
  • DNA Repair
  • Embryo, Mammalian / cytology
  • Endopeptidases / metabolism*
  • Endosomal Sorting Complexes Required for Transport / metabolism*
  • Fibroblasts / metabolism
  • Genomic Instability
  • HEK293 Cells
  • Histones / metabolism
  • Homologous Recombination / genetics
  • Humans
  • Inhibitor of Apoptosis Proteins / metabolism*
  • Lysine / metabolism
  • Mice
  • Multiprotein Complexes / metabolism
  • Nerve Tissue Proteins / metabolism*
  • Polyubiquitin / metabolism
  • Protein Transport
  • Ubiquitin Thiolesterase / metabolism*
  • Ubiquitination*

Substances

  • BIRC6 protein, human
  • BIRC6 protein, mouse
  • Cell Cycle Proteins
  • Chromatin
  • Cytoskeletal Proteins
  • Endosomal Sorting Complexes Required for Transport
  • H2AX protein, human
  • Histones
  • Inhibitor of Apoptosis Proteins
  • MCPH1 protein, human
  • Multiprotein Complexes
  • Nerve Tissue Proteins
  • Polyubiquitin
  • Endopeptidases
  • USP8 protein, human
  • Ubiquitin Thiolesterase
  • Lysine