The contribution of CMP kinase to the efficiency of DNA repair

Cell Cycle. 2015;14(3):354-63. doi: 10.4161/15384101.2014.987618.

Abstract

Cellular supply of deoxynucleoside triphosphates (dNTPs) is crucial for DNA replication and repair. In this study, we investigated the role of CMP/UMP kinase (CMPK), an enzyme catalyzes CDP formation, in DNA repair. Knockdown of CMPK delays DNA repair during recovery from UV damage in serum-deprived cells but not in the cells without serum deprivation. Exogenous supply of cytidine or deoxycytidine facilitates DNA repair dependent on CMPK in serum-deprived cells, suggesting that the synthesis of dCDP or CDP determines the rate of repair. However, CMPK knockdown does not affect the steady state level of dCTP in serum-deprived cells. We then found the localization of CMPK at DNA damage sites and its complex formation with Tip60 and ribonucleotide reductase. Our analysis demonstrated that the N-terminal 32-amino-acid of CMPK is required for its recruitment to DNA damage sites in a Tip60-dependent manner. Re-expression of wild-type but not N-terminus deleted CMPK restores the efficiency of DNA repair in CMPK knockdown cells. We proposed that site-specific dCDP formation via CMPK provides a means to facilitate DNA repair in serum-deprived cells.

Keywords: CMP/UMP kinase; DNA repair; Tip60; UV irradiation; dNTP; dNTP, deoxynucleoside triphosphates; CMPK, CMP/UMP kinase; RNR, ribonucleotide reductase; 6-4 pp, (6-4) photoproduct; R1C, C-terminal fragment of R1 subunit of RNR; recruitment to DNA damage sites; ribonucleotide reductase; serum deprivation.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Culture Media, Serum-Free
  • Cytidine / metabolism
  • DNA Damage
  • DNA Repair* / radiation effects
  • Deoxycytosine Nucleotides / metabolism
  • Gene Knockdown Techniques
  • HEK293 Cells
  • HeLa Cells
  • Humans
  • MCF-7 Cells
  • Models, Biological
  • Multiprotein Complexes / metabolism
  • Nucleoside-Phosphate Kinase / metabolism*
  • Ultraviolet Rays

Substances

  • Culture Media, Serum-Free
  • Deoxycytosine Nucleotides
  • Multiprotein Complexes
  • 2'-deoxycytidine 5'-triphosphate
  • Cytidine
  • cytidylate kinase
  • Nucleoside-Phosphate Kinase