Identification of frequent differentially methylated region in sporadic bladder cancers

Urol Int. 2015;94(4):479-84. doi: 10.1159/000365197. Epub 2014 Sep 6.

Abstract

Introduction: Aberrant methylation levels in the cytosine-phosphate-guanine island (CpGi) region from exon 1 to intron 1 of the zygote arrest 1 (ZAR1) gene have been reported in several types of human cancers, including melanoma, brain tumor, and hepatocellular carcinoma. In the present study, methylation levels at the CpGi of ZAR1 exon 1/intron 1 in bladder cancer specimens were analyzed using mass spectrometry.

Materials and methods: Genomic DNA was extracted from 20 sporadic bladder cancers, and the methylation levels at ZAR1 CpGi were quantitatively examined by the MassARRAY EpiTYPER method.

Result: The methylation levels at specific CpG sites of the ZAR1 CpGi were significantly lower in high-grade bladder cancers than in low-grade tumors.

Conclusions: The results of the present study indicated a decreased methylation level at CpG sites of ZAR1 exon 1/intron 1. CpGi could serve as a biomarker for invasive bladder cancer.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Biomarkers, Tumor / genetics*
  • CpG Islands
  • DNA Methylation*
  • Egg Proteins / genetics*
  • Exons
  • Humans
  • Introns
  • Neoplasm Grading
  • Neoplasm Invasiveness
  • Neoplasm Staging
  • Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
  • Urinary Bladder Neoplasms / genetics*
  • Urinary Bladder Neoplasms / pathology

Substances

  • Biomarkers, Tumor
  • Egg Proteins
  • Zar1 protein, human