Arabidopsis DELLA and two HD-ZIP transcription factors regulate GA signaling in the epidermis through the L1 box cis-element

Plant Cell. 2014 Jul;26(7):2905-19. doi: 10.1105/tpc.114.127647. Epub 2014 Jul 2.

Abstract

Gibberellins (GAs) are plant hormones that affect plant growth and regulate gene expression differentially across tissues. To study the molecular mechanisms underlying GA signaling in Arabidopsis thaliana, we focused on a GDSL lipase gene (LIP1) induced by GA and repressed by DELLA proteins. LIP1 contains an L1 box promoter sequence, conserved in the promoters of epidermis-specific genes, that is bound by ATML1, an HD-ZIP transcription factor required for epidermis specification. In this study, we demonstrate that LIP1 is specifically expressed in the epidermis and that its L1 box sequence mediates GA-induced transcription. We show that this sequence is overrepresented in the upstream regulatory regions of GA-induced and DELLA-repressed transcriptomes and that blocking GA signaling in the epidermis represses the expression of L1 box-containing genes and negatively affects seed germination. We show that DELLA proteins interact directly with ATML1 and its paralogue PDF2 and that silencing of both HD-ZIP transcription factors inhibits epidermal gene expression and delays germination. Our results indicate that, upon seed imbibition, increased GA levels reduce DELLA protein abundance and release ATML1/PDF2 to activate L1 box gene expression, thus enhancing germination potential.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Arabidopsis / cytology
  • Arabidopsis / genetics*
  • Arabidopsis / physiology
  • Arabidopsis Proteins / genetics*
  • Arabidopsis Proteins / metabolism
  • Gene Expression Regulation, Plant*
  • Genes, Reporter
  • Germination
  • Gibberellins / metabolism*
  • Homeodomain Proteins / genetics
  • Homeodomain Proteins / metabolism
  • Models, Genetic
  • Nicotiana / cytology
  • Nicotiana / genetics
  • Nicotiana / physiology
  • Plant Epidermis / cytology
  • Plant Epidermis / genetics
  • Plant Epidermis / physiology
  • Plant Growth Regulators / metabolism*
  • Promoter Regions, Genetic / genetics
  • Recombinant Fusion Proteins
  • Seeds / cytology
  • Seeds / genetics
  • Seeds / physiology
  • Signal Transduction
  • Transcription Factors / genetics
  • Transcription Factors / metabolism

Substances

  • ATML1 protein, Arabidopsis
  • Arabidopsis Proteins
  • GAI protein, Arabidopsis
  • Gibberellins
  • Homeodomain Proteins
  • PDF2 protein, Arabidopsis
  • Plant Growth Regulators
  • Recombinant Fusion Proteins
  • Transcription Factors