C to U RNA editing mediated by APOBEC1 requires RNA-binding protein RBM47

EMBO Rep. 2014 Aug;15(8):903-10. doi: 10.15252/embr.201438450. Epub 2014 Jun 10.

Abstract

Cytidine (C) to Uridine (U) RNA editing is a post-transcriptional modification that is accomplished by the deaminase APOBEC1 and its partnership with the RNA-binding protein A1CF. We identify and characterise here a novel RNA-binding protein, RBM47, that interacts with APOBEC1 and A1CF and is expressed in tissues where C to U RNA editing occurs. RBM47 can substitute for A1CF and is necessary and sufficient for APOBEC1-mediated editing in vitro. Editing is further impaired in Rbm47-deficient mutant mice. These findings suggest that RBM47 and APOBEC1 constitute the basic machinery for C to U RNA editing.

Keywords: APOBEC1; Apolipoprotein b; RBM47; RNA editing; intestine.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • APOBEC-1 Deaminase
  • Animals
  • Caco-2 Cells
  • Cell Nucleus / metabolism
  • Cytidine / metabolism
  • Cytidine Deaminase / physiology*
  • Gene Expression
  • Humans
  • Mice, Transgenic
  • Protein Transport
  • RNA Editing*
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism
  • RNA-Binding Proteins / genetics*
  • RNA-Binding Proteins / metabolism
  • Uridine / metabolism

Substances

  • RNA, Messenger
  • RNA-Binding Proteins
  • Rbm47 protein, mouse
  • Cytidine
  • APOBEC-1 Deaminase
  • APOBEC1 protein, human
  • Apobec1 protein, mouse
  • Cytidine Deaminase
  • Uridine