GANP regulates the choice of DNA repair pathway by DNA-PKcs interaction in AID-dependent IgV region diversification

J Immunol. 2014 Jun 15;192(12):5529-39. doi: 10.4049/jimmunol.1400021. Epub 2014 May 7.

Abstract

RNA export factor germinal center-associated nuclear protein (GANP) interacts with activation-induced cytidine deaminase (AID) and shepherds it from the cytoplasm to the nucleus and toward the IgV region loci in B cells. In this study, we demonstrate a role for GANP in the repair of AID-initiated DNA damage in chicken DT40 B cells to generate IgV region diversity by gene conversion and somatic hypermutation. GANP plays a positive role in IgV region diversification of DT40 B cells in a nonhomologous end joining-proficient state. DNA-PKcs physically interacts with GANP, and this interaction is dissociated by dsDNA breaks induced by a topoisomerase II inhibitor, etoposide, or AID overexpression. GANP affects the choice of DNA repair mechanism in B cells toward homologous recombination rather than nonhomologous end joining repair. Thus, GANP presumably plays a critical role in protection of the rearranged IgV loci by favoring homologous recombination of the DNA breaks under accelerated AID recruitment.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • B-Lymphocytes / immunology
  • Cytidine Deaminase / genetics
  • Cytidine Deaminase / immunology*
  • DNA Repair / genetics
  • DNA Repair / immunology*
  • DNA-Activated Protein Kinase / genetics
  • DNA-Activated Protein Kinase / immunology*
  • DNA-Binding Proteins / genetics
  • DNA-Binding Proteins / immunology*
  • Genetic Loci / immunology
  • Immunoglobulin Variable Region / genetics
  • Immunoglobulin Variable Region / immunology*
  • Mice
  • Mice, Knockout
  • Nuclear Proteins / genetics
  • Nuclear Proteins / immunology*
  • Phosphoproteins / genetics
  • Phosphoproteins / immunology*
  • Somatic Hypermutation, Immunoglobulin / genetics
  • Somatic Hypermutation, Immunoglobulin / immunology*

Substances

  • DNA-Binding Proteins
  • GANP protein, mouse
  • Immunoglobulin Variable Region
  • Nuclear Proteins
  • Phosphoproteins
  • DNA-Activated Protein Kinase
  • Prkdc protein, mouse
  • AICDA (activation-induced cytidine deaminase)
  • Cytidine Deaminase