The family-wide structure and function of human dual-specificity protein phosphatases

Acta Crystallogr D Biol Crystallogr. 2014 Feb;70(Pt 2):421-35. doi: 10.1107/S1399004713029866. Epub 2014 Jan 29.

Abstract

Dual-specificity protein phosphatases (DUSPs), which dephosphorylate both phosphoserine/threonine and phosphotyrosine, play vital roles in immune activation, brain function and cell-growth signalling. A family-wide structural library of human DUSPs was constructed based on experimental structure determination supplemented with homology modelling. The catalytic domain of each individual DUSP has characteristic features in the active site and in surface-charge distribution, indicating substrate-interaction specificity. The active-site loop-to-strand switch occurs in a subtype-specific manner, indicating that the switch process is necessary for characteristic substrate interactions in the corresponding DUSPs. A comprehensive analysis of the activity-inhibition profile and active-site geometry of DUSPs revealed a novel role of the active-pocket structure in the substrate specificity of DUSPs. A structure-based analysis of redox responses indicated that the additional cysteine residues are important for the protection of enzyme activity. The family-wide structures of DUSPs form a basis for the understanding of phosphorylation-mediated signal transduction and the development of therapeutics.

Keywords: DUSPs; dual-specificity protein phosphatases; protein tyrosine phosphatases.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Catalytic Domain
  • Crystallography, X-Ray
  • Cysteine / chemistry
  • Dual-Specificity Phosphatases / antagonists & inhibitors
  • Dual-Specificity Phosphatases / chemistry*
  • Dual-Specificity Phosphatases / classification*
  • Dual-Specificity Phosphatases / genetics
  • Enzyme Inhibitors / chemistry*
  • Escherichia coli / genetics
  • Escherichia coli / metabolism
  • Humans
  • Hydrolysis
  • Models, Molecular
  • Oxidation-Reduction
  • Phosphoserine / chemistry
  • Phosphothreonine / chemistry
  • Phosphotyrosine / chemistry
  • Phylogeny*
  • Protein Structure, Secondary
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / classification
  • Recombinant Proteins / genetics
  • Signal Transduction
  • Structural Homology, Protein
  • Substrate Specificity

Substances

  • Enzyme Inhibitors
  • Recombinant Proteins
  • Phosphothreonine
  • Phosphoserine
  • Phosphotyrosine
  • Dual-Specificity Phosphatases
  • Cysteine

Associated data

  • PDB/4JMJ
  • PDB/4JMK
  • PDB/4KI9