RBM10 regulates alternative splicing

FEBS Lett. 2014 Mar 18;588(6):942-7. doi: 10.1016/j.febslet.2014.01.052. Epub 2014 Feb 11.

Abstract

RBM10, originally called S1-1, is a nuclear RNA-binding protein with domains characteristic of RNA processing proteins. It has been reported that RBM10 constitutes spliceosome complexes and that RBM5, a close homologue of RBM10, regulates alternative splicing of apoptosis-related genes, Fas and cFLIP. In this study, we examined whether RBM10 has a regulatory function in splicing similar to RBM5, and determined that it indeed regulates alternative splicing of Fas and Bcl-x genes. RBM10 promotes exon skipping of Fas pre-mRNA as well as selection of an internal 5'-splice site in Bcl-x pre-mRNA. We propose a consensus RBM10-binding sequence at 5'-splice sites of target exons and a mechanistic model of RBM10 action in the alternative splicing.

Keywords: Alternative splicing; Bcl-x; Fas; RBM10; RBM5; S1-1.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alternative Splicing*
  • Apoptosis Regulatory Proteins / genetics
  • Apoptosis Regulatory Proteins / metabolism
  • Base Sequence
  • Binding Sites
  • Caspases / genetics
  • Caspases / metabolism
  • Cell Cycle Proteins / physiology
  • Consensus Sequence
  • DNA-Binding Proteins / physiology
  • HeLa Cells
  • Humans
  • Isoenzymes / genetics
  • Isoenzymes / metabolism
  • RNA Splice Sites
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism*
  • RNA-Binding Proteins / physiology*
  • Tumor Suppressor Proteins / physiology
  • fas Receptor / genetics
  • fas Receptor / metabolism

Substances

  • Apoptosis Regulatory Proteins
  • Cell Cycle Proteins
  • DNA-Binding Proteins
  • FAS protein, human
  • Isoenzymes
  • RBM10 protein, human
  • RBM5 protein, human
  • RNA Splice Sites
  • RNA, Messenger
  • RNA-Binding Proteins
  • Tumor Suppressor Proteins
  • fas Receptor
  • Caspases