Array-assisted characterization of a fucosyltransferase required for the biosynthesis of complex core modifications of nematode N-glycans

J Biol Chem. 2013 Jul 19;288(29):21015-21028. doi: 10.1074/jbc.M113.479147. Epub 2013 Jun 10.

Abstract

Fucose is a common monosaccharide component of cell surfaces and is involved in many biological recognition events. Therefore, definition and exploitation of the specificity of the enzymes (fucosyltransferases) involved in fucosylation is a recurrent theme in modern glycosciences. Despite various studies, the specificities of many fucosyltransferases are still unknown, so new approaches are required to study these. The model nematode Caenorhabditis elegans expresses a wide range of fucosylated glycans, including N-linked oligosaccharides with unusual complex core modifications. Up to three fucose residues can be present on the standard N,N'-diacetylchitobiose unit of these N-glycans, but only the fucosyltransferases responsible for transfer of two of these (the core α1,3-fucosyltransferase FUT-1 and the core α1,6-fucosyltransferase FUT-8) were previously characterized. By use of a glycan library in both array and solution formats, we were able to reveal that FUT-6, another C. elegans α1,3-fucosyltransferase, modifies nematode glycan cores, specifically the distal N-acetylglucosamine residue; this result is in accordance with glycomic analysis of fut-6 mutant worms. This core-modifying activity of FUT-6 in vitro and in vivo is in addition to its previously determined ability to synthesize Lewis X epitopes in vitro. A larger scale synthesis of a nematode N-glycan core in vitro using all three fucosyltransferases was performed, and the nature of the glycosidic linkages was determined by NMR. FUT-6 is probably the first eukaryotic glycosyltransferase whose specificity has been redefined with the aid of glycan microarrays and so is a paradigm for the study of other unusual glycosidic linkages in model and parasitic organisms.

Keywords: Glycan; Glycosyltransferases; Invertebrates; Mass Spectrometry (MS); Microarray; Oligosaccharide.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Biosynthetic Pathways
  • Caenorhabditis elegans / enzymology*
  • Caenorhabditis elegans Proteins / metabolism*
  • Fucose / chemistry
  • Fucose / metabolism
  • Fucosyltransferases / metabolism*
  • Glycomics
  • Glycosylation
  • Magnetic Resonance Spectroscopy
  • Mass Spectrometry
  • Microarray Analysis*
  • Mutant Proteins / metabolism
  • Polysaccharides / biosynthesis*
  • Polysaccharides / chemistry
  • Polysaccharides / metabolism
  • Solutions
  • Substrate Specificity

Substances

  • Caenorhabditis elegans Proteins
  • Mutant Proteins
  • Polysaccharides
  • Solutions
  • Fucose
  • FUT-6 protein, C elegans
  • Fucosyltransferases