DJ-1 variants in Indian Parkinson's disease patients

Dis Markers. 2012;33(3):127-35. doi: 10.1155/2012/467085.

Abstract

Parkinson's disease (PD) is a common neurodegenerative movement disorder. Among the candidate genes, DJ-1 accounts for about 1% of the cases in different populations. We aim to find the contribution of the gene towards PD among Indians. By screening DJ-1 in 308 PD patients of eastern India and 248 ethnically matched controls, a total of 21 nucleotide variants - including two nonsynonymous changes - were detected. p.Arg98Gln was identified in 6 unrelated patients and 2 controls while p.Val35Ile, a novel change, was found only in 2 unrelated patients. A SNP (rs7517357) was observed to be moderately associated with increased risk of PD (p< 0.05). The deletion allele (g.168_185del) of a known 18 bp del/ins/dup polymorphism was found to be over represented (p< 0.05) among older patients (> 40 years) compared to the controls (> 45 years). Two of the patients, also heterozygotes for PINK1 mutation, had more severe disease phenotypes, consistent with the reported interaction between PINK1 and DJ-1 gene products [19]. Our results demonstrate that up to 3.9% (12/308) of PD patients of eastern India harbor DJ-1 variants that should be explored further for any causal relationship with PD.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Amino Acid Sequence
  • Case-Control Studies
  • Female
  • Gene Deletion
  • Gene Duplication
  • Gene Frequency
  • Heterozygote
  • Humans
  • India / epidemiology
  • Intracellular Signaling Peptides and Proteins / genetics*
  • Male
  • Middle Aged
  • Molecular Sequence Data
  • Mutagenesis, Insertional
  • Oncogene Proteins / genetics*
  • Parkinson Disease / epidemiology
  • Parkinson Disease / genetics*
  • Polymorphism, Single Nucleotide*
  • Protein Deglycase DJ-1
  • Protein Kinases / genetics

Substances

  • Intracellular Signaling Peptides and Proteins
  • Oncogene Proteins
  • Protein Kinases
  • PTEN-induced putative kinase
  • PARK7 protein, human
  • Protein Deglycase DJ-1